RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 GALR3O60755 368 aaPredicted RBP21.18■□□□□ 0.98
CDX1-201ENST00000231656 CBFA2T3O75081 653 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 IFNW1P05000 195 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 HMGN2P05204 90 aaKnown RBP21.18■□□□□ 0.98
CDX1-201ENST00000231656 FESP07332 822 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 CYP4B1P13584 511 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 RHCEP18577 417 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 CRHBPP24387 322 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 MC3RP41968 323 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 LIMS1P48059 325 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 ANXA11P50995 505 aaKnown RBP21.18■□□□□ 0.98
CDX1-201ENST00000231656 RPS6KA3P51812 740 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 CDH12P55289 794 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 PRR5P85299 388 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 IL1RL1Q01638 556 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 FUT5Q11128 374 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 RAPSNQ13702 412 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 LASP1Q14847 261 aaKnown RBP21.18■□□□□ 0.98
CDX1-201ENST00000231656 TTC29Q8NA56 475 aaPredicted RBP21.18■□□□□ 0.98
CDX1-201ENST00000231656 ZNF607Q96SK3 696 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 LYRM4Q9HD34 91 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 ENAMQ9NRM1 1142 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 ACER3Q9NUN7 267 aa21.18■□□□□ 0.98
CDX1-201ENST00000231656 HYKKA2RU49 373 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 FITM1A5D6W6 292 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 MED26O95402 600 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 NR2F1P10589 423 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 KCNJ5P48544 419 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 HMGA2P52926 109 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 LTB4RQ15722 352 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 EXOC3L2Q2M3D2 409 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 SLITRK4Q8IW52 837 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 OR10G2Q8NGC3 310 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 C16orf58Q96GQ5 468 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 COL21A1Q96P44 957 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 GABARAPL3Q9BY60 117 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 BCL2L10Q9HD36 194 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 MS4A12Q9NXJ0 267 aa21.17■□□□□ 0.98
CDX1-201ENST00000231656 ZNF860A6NHJ4 632 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 OR2B3O76000 313 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 PPP2R1BP30154 601 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 OLR1P78380 273 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 NDUFA9Q16795 377 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 MICAQ29983 383 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 GARNL3Q5VVW2 1013 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 ZNF773Q6PK81 442 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 LGI4Q8N135 537 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 NUP43Q8NFH3 380 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 OR1L3Q8NH93 324 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 OTUB1Q96FW1 271 aaPredicted RBP21.16■□□□□ 0.98
CDX1-201ENST00000231656 PITX2Q99697 317 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 YIPF4Q9BSR8 244 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 NPLQ9BXD5 320 aaPredicted RBP21.16■□□□□ 0.98
CDX1-201ENST00000231656 C3orf14Q9HBI5 128 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 ANKHQ9HCJ1 492 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 FGF21Q9NSA1 209 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 KCND3Q9UK17 655 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 NDRG4Q9ULP0 352 aaKnown RBP21.16■□□□□ 0.98
CDX1-201ENST00000231656 FAM32AQ9Y421 112 aaKnown RBP21.16■□□□□ 0.98
CDX1-201ENST00000231656 HSPE1-MOB4S4R3N1 261 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 SCN2AQ99250 2005 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 SEC16AO15027 2179 aa21.16■□□□□ 0.98
CDX1-201ENST00000231656 H3BSA7 217 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 EPHA2P29317 976 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 GSTT1P30711 240 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 MAN2A2P49641 1150 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 FAM53BQ14153 422 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 GRM7Q14831 915 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 SAMD14Q8IZD0 417 aaPredicted RBP21.15■□□□□ 0.98
CDX1-201ENST00000231656 LRRC25Q8N386 305 aaPredicted RBP21.15■□□□□ 0.98
CDX1-201ENST00000231656 SLC5A8Q8N695 610 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 SETD9Q8NE22 299 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 OR4K14Q8NGD5 310 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 OR9A4Q8NGU2 314 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 OR52J3Q8NH60 311 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 BBS10Q8TAM1 723 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 RASSF5Q8WWW0 418 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 PROX1Q92786 737 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 ZNF501Q96CX3 271 aaPredicted RBP21.15■□□□□ 0.98
CDX1-201ENST00000231656 FEVQ99581 238 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 PSD2Q9BQI7 771 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 NTMQ9P121 344 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 A8MVJ9 347 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 SGK494L7N484 410 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 GDF9O60383 454 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 SERPINB7O75635 380 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 CHRM4P08173 479 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 FUT4P22083 530 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 XKP51811 444 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 CRISP3P54108 245 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 EMP3P54852 163 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 SIM1P81133 766 aaPredicted RBP21.15■□□□□ 0.98
CDX1-201ENST00000231656 CDK5R2Q13319 367 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 TOP3AQ13472 1001 aaPredicted RBP21.15■□□□□ 0.98
CDX1-201ENST00000231656 PHF19Q5T6S3 580 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 KAT2AQ92830 837 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 GIMAP5Q96F15 307 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 ZNF354BQ96LW1 612 aa21.15■□□□□ 0.98
CDX1-201ENST00000231656 ADNPQ9H2P0 1102 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms