RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 UCP1P25874 307 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 LMO4P61968 165 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 GSTO1P78417 241 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 GAMTQ14353 236 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 C17orf58Q2M2W7 97 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 SHROOM1Q2M3G4 852 aaPredicted RBP4.82□□□□□ -1.64
FAM49B-230ENST00000639004 AGKQ53H12 422 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 LIPKQ5VXJ0 399 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 CWC27Q6UX04 472 aaKnown RBP4.82□□□□□ -1.64
FAM49B-230ENST00000639004 ELMOD2Q8IZ81 293 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 MLKLQ8NB16 471 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 BEST4Q8NFU0 473 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 ITLN1Q8WWA0 313 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 PHYHIPQ92561 330 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 BIRC7Q96CA5 298 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 CPXM1Q96SM3 734 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 NRN1Q9NPD7 142 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 STARD5Q9NSY2 213 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 EMCNQ9ULC0 261 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 NUDCQ9Y266 331 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 KDM6BO15054 1643 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 SHROOM2Q13796 1616 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 KIF14Q15058 1648 aa4.82□□□□□ -1.64
FAM49B-230ENST00000639004 CHD1O14646 1710 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 SUPT6HQ7KZ85 1726 aaKnown RBP4.81□□□□□ -1.64
FAM49B-230ENST00000639004 K7ERI5 159 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 ADAM12O43184 909 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 PHF1O43189 567 aaPredicted RBP4.81□□□□□ -1.64
FAM49B-230ENST00000639004 ZCCHC18P0CG32 403 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 ETS1P14921 441 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 BCL3P20749 454 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 TMOD1P28289 359 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 PTPN4P29074 926 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 PRDX6P30041 224 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 PPP2R1BP30154 601 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 BTG3Q14201 252 aaPredicted RBP4.81□□□□□ -1.64
FAM49B-230ENST00000639004 ZKSCAN8Q15776 578 aaPredicted RBP4.81□□□□□ -1.64
FAM49B-230ENST00000639004 PARP10Q53GL7 1025 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 NHLRC3Q5JS37 347 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 CNSTQ6PJW8 725 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 LUZP1Q86V48 1076 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 AMZ2Q86W34 360 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 PYROXD2Q8N2H3 581 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 MRPL43Q8N983 215 aaKnown RBP4.81□□□□□ -1.64
FAM49B-230ENST00000639004 C19orf43Q9BQ61 176 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 TTYH2Q9BSA4 534 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 GPR174Q9BXC1 333 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 FAM124BQ9H5Z6 455 aaPredicted RBP4.81□□□□□ -1.64
FAM49B-230ENST00000639004 ELL3Q9HB65 397 aaPredicted RBP4.81□□□□□ -1.64
FAM49B-230ENST00000639004 NINJ2Q9NZG7 142 aa4.81□□□□□ -1.64
FAM49B-230ENST00000639004 DAPK1P53355 1430 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 RNF103-CHMP3A0A140T963 221 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 E2F3O00716 465 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 CYB561D2O14569 222 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 MCF2LO15068 1137 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 SH3BGRLO75368 114 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 VENTXO95231 258 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 MT-ATP6P00846 226 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 HSD17B1P14061 328 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 GAP43P17677 238 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 MATKP42679 507 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 SLC6A8P48029 635 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 NME3Q13232 169 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 LINC00242Q5T6M2 205 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 FAM159AQ6UWV7 190 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 ABRAXAS1Q6UWZ7 409 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 DPY19L2P2Q6ZN68 376 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 KDM8Q8N371 416 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 HDDC3Q8N4P3 179 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 ANKRD9Q96BM1 317 aaPredicted RBP4.8□□□□□ -1.64
FAM49B-230ENST00000639004 RAB3CQ96E17 227 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 FOXN4Q96NZ1 517 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 ADGRL4Q9HBW9 690 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.8□□□□□ -1.64
FAM49B-230ENST00000639004 MLXQ9UH92 298 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 CIDEBQ9UHD4 219 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 SLC9A8Q9Y2E8 581 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 AKNAQ7Z591 1439 aa4.8□□□□□ -1.64
FAM49B-230ENST00000639004 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 KRT87PA6NCN2 255 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 BUB1O43683 1085 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 HPP00738 406 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 CYP11B1P15538 503 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 HSPA1LP34931 641 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 ELK3P41970 407 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 MAGEA4P43358 317 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 RABIFP47224 123 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 NUMBP49757 651 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 SGSHP51688 502 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 ATXN3P54252 364 aaPredicted RBP4.79□□□□□ -1.64
FAM49B-230ENST00000639004 DSCR10P59022 87 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 HIGD2BQ4VC39 106 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 C14orf28Q4W4Y0 310 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 ACER2Q5QJU3 275 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 CASC1Q6TDU7 716 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 ATRAIDQ6UW56 229 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 OLFM4Q6UX06 510 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 SUMF1Q8NBK3 374 aa4.79□□□□□ -1.64
FAM49B-230ENST00000639004 ZNF397Q8NF99 534 aaPredicted RBP4.79□□□□□ -1.64
FAM49B-230ENST00000639004 U2AF1L4Q8WU68 220 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms