RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 C1orf189Q5VU69 101 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 PPP4R4Q6NUP7 873 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 KRT73Q86Y46 540 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 GALNT12Q8IXK2 581 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 VWA5B2Q8N398 1253 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 SLC35A4Q96G79 324 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 VPS50Q96JG6 964 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 ZNF578Q96N58 590 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 TREX2Q9BQ50 279 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 NTN4Q9HB63 628 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 ADAP2Q9NPF8 381 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 MKKSQ9NPJ1 570 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 CALML5Q9NZT1 146 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 ZNF639Q9UID6 485 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 COL5A1P20908 1838 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 LAMA1P25391 3075 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 A0A0G2JPF8 293 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 SAC3D1A6NKF1 404 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 HNRNPCL2B2RXH8 293 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 HNRNPCL3B7ZW38 293 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 GNGT2O14610 69 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 HYAL3O43820 417 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 COQ9O75208 318 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 JRKO75564 520 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 SERPINB7O75635 380 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 SOX30O94993 753 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 MFN2O95140 757 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 HNRNPCL4P0DMR1 293 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 MAOAP21397 527 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 AQP4P55087 323 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 IFI44LQ53G44 452 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 EXOSC6Q5RKV6 272 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 DGAT2L6Q6ZPD8 337 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 QSOX2Q6ZRP7 698 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 PACRGLQ8N7B6 248 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 CDRT4Q8N9R6 151 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 AGBL5Q8NDL9 886 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 RASSF5Q8WWW0 418 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 GATA6Q92908 595 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 OTUB1Q96FW1 271 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 PTCHD1Q96NR3 888 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 TRNT1Q96Q11 434 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 SPATA5L1Q9BVQ7 753 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 NECTIN3Q9NQS3 549 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 KCNE3Q9Y6H6 103 aa16.49■□□□□ 0.23
SHKBP1-224ENST00000600718 SCRG1O75711 98 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 ETS2P15036 469 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 S1PR1P21453 382 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 RPS6KA3P51812 740 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 IL11RAQ14626 422 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 GPAT3Q53EU6 434 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 RNF220Q5VTB9 566 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 HEPHL1Q6MZM0 1159 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 PPP1R3BQ86XI6 285 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 GALNT4Q8N4A0 578 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 SLC16A11Q8NCK7 471 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 SIMC1Q8NDZ2 872 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 RNF217Q8TC41 542 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 DOK4Q8TEW6 326 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 SLC9A6Q92581 669 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 C7orf34Q96L11 122 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 NR1H4Q96RI1 486 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 BTBD2Q9BX70 525 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 PIGUQ9H490 435 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 TMEM9BQ9NQ34 198 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 OCIAD1Q9NX40 245 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 OAZ3Q9UMX2 235 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 PADI2Q9Y2J8 665 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 HCN4Q9Y3Q4 1203 aa16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 GPC6Q9Y625 555 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-224ENST00000600718 ALOX5P09917 674 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 FGF5P12034 268 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 VLDLRP98155 873 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 FUT5Q11128 374 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 PWWP2BQ6NUJ5 590 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 C16orf62Q7Z3J2 963 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 B3GNT8Q7Z7M8 397 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 NAXDQ8IW45 347 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 SPPL2AQ8TCT8 520 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 BTBD9Q96Q07 612 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 SLC29A1Q99808 456 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 EDEM2Q9BV94 578 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 PCDHGB3Q9Y5G1 929 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 OR2W5A6NFC9 320 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 EFCAB7A8K855 629 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 ACOX3O15254 700 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 CBX7O95931 251 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 IFNA16P05015 189 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 CHRM4P08173 479 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 ACP2P11117 423 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 HSPA13P48723 471 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 EXOSC7Q15024 291 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 EPHX4Q8IUS5 362 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 SMYD1Q8NB12 490 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 OR52R1Q8NGF1 315 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 GEMIN6Q8WXD5 167 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 TMBIM1Q969X1 311 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 CLIP3Q96DZ5 547 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 COL21A1Q96P44 957 aa16.47■□□□□ 0.23
SHKBP1-224ENST00000600718 STACQ99469 402 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms