RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ERVK-8P63133 956 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 PLIN5Q00G26 463 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 CUL3Q13618 768 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 RCAN2Q14206 197 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 RPS6KA2Q15349 733 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 TRMT10CQ7L0Y3 403 aaKnown RBP15.78■□□□□ 0.12
RETREG3-210ENST00000590541 SLC29A4Q7RTT9 530 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 GOLGA7Q7Z5G4 137 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 LCA5Q86VQ0 697 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 SPPL2AQ8TCT8 520 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 TANKQ92844 425 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 MTBPQ96DY7 904 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 MRPL57Q9BQC6 102 aaKnown RBP15.78■□□□□ 0.12
RETREG3-210ENST00000590541 NTMT1Q9BV86 223 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 ERVK-6Q9BXR3 956 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 ANGPTL4Q9BY76 406 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 OR51B5Q9H339 312 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.78■□□□□ 0.12
RETREG3-210ENST00000590541 ERVK-19Q9WJR5 959 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 IQANK1A0A1B0GTG1 560 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 A8MXE2 369 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 POC1B-GALNT4F8VUJ3 575 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 TP53I11O14683 189 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 CTIFO43310 598 aaKnown RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 RCBTB2O95199 551 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 SNX4O95219 450 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 CNOT4O95628 575 aaKnown RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 FPR1P21462 350 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 SLAMF1Q13291 335 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 DDX39BQ13838 428 aaKnown RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 SPRED3Q2MJR0 410 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 PLXDC2Q6UX71 529 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 RNF111Q6ZNA4 994 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 ADGRE4PQ86SQ3 457 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 PLD6Q8N2A8 252 aaKnown RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 PTGR2Q8N8N7 351 aaPredicted RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 ZNF441Q8N8Z8 693 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 DCAKDQ8WVC6 231 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 ATP6V1E2Q96A05 226 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 TRIM44Q96DX7 344 aaPredicted RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 ZFP3Q96NJ6 502 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 MTERF1Q99551 399 aaKnown RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 TUBA1CQ9BQE3 449 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 MRPL46Q9H2W6 279 aaKnown RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 RPF2Q9H7B2 306 aaKnown RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 UBTD1Q9HAC8 227 aa15.77■□□□□ 0.12
RETREG3-210ENST00000590541 TEX10Q9NXF1 929 aaPredicted RBP15.77■□□□□ 0.12
RETREG3-210ENST00000590541 EXOC1LA0A1B0GW35 172 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 PLPP1O14494 284 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 CYP4B1P13584 511 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 ALOX15P16050 662 aaPredicted RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 PTPN6P29350 595 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 BUD31P41223 144 aaPredicted RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 CASP3P42574 277 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 MASP1P48740 699 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 CCNG1P51959 295 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 KRTAP1-1Q07627 177 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 ZNF267Q14586 743 aaPredicted RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 TOMM20Q15388 145 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 CPSF6Q16630 551 aaKnown RBP eCLIP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 UBAP2Q5T6F2 1119 aaKnown RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 TIFABQ6ZNK6 161 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 GPR180Q86V85 440 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 PACS2Q86VP3 889 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 PHC2Q8IXK0 858 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 ST13P4Q8IZP2 240 aaPredicted RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 TAGAPQ8N103 731 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 WDR20Q8TBZ3 569 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 INTS12Q96CB8 462 aaKnown RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 TMEM41AQ96HV5 264 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 WFIKKN1Q96NZ8 548 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 SERPINI1Q99574 410 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 PELOQ9BRX2 385 aaKnown RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 SORBS1Q9BX66 1292 aaKnown RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 GSX2Q9BZM3 304 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 PIGMQ9H3S5 423 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 DDX31Q9H8H2 851 aaKnown RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 LYARQ9NX58 379 aaKnown RBP15.76■□□□□ 0.11
RETREG3-210ENST00000590541 FETUBQ9UGM5 382 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 NFU1Q9UMS0 254 aa15.76■□□□□ 0.11
RETREG3-210ENST00000590541 CHD3Q12873 2000 aaKnown RBP15.75■□□□□ 0.11
RETREG3-210ENST00000590541 RAI1Q7Z5J4 1906 aaPredicted RBP15.75■□□□□ 0.11
RETREG3-210ENST00000590541 CUBNO60494 3623 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 OR6C76A6NM76 312 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 TRIM49D1C9J1S8 452 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 GNB5O14775 395 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 SH3BGRLO75368 114 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 PRKRAO75569 313 aaKnown RBP15.75■□□□□ 0.11
RETREG3-210ENST00000590541 SEMA3DO95025 777 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 SIX3O95343 332 aaPredicted RBP15.75■□□□□ 0.11
RETREG3-210ENST00000590541 ACTL6AO96019 429 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 CPN1P15169 458 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 RPS13P62277 151 aaKnown RBP15.75■□□□□ 0.11
RETREG3-210ENST00000590541 FAM27E3Q08E93 113 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 GGTA1PQ4G0N0 100 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 C18orf63Q68DL7 685 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 YRDCQ86U90 279 aaKnown RBP15.75■□□□□ 0.11
RETREG3-210ENST00000590541 GCNT2Q8N0V5 402 aa15.75■□□□□ 0.11
RETREG3-210ENST00000590541 FAM83FQ8NEG4 500 aaPredicted RBP15.75■□□□□ 0.11
RETREG3-210ENST00000590541 PHF21BQ96EK2 531 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms