RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 HYKKA2RU49 373 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 FABP7O15540 132 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 FLRT2O43155 660 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 ARL6IP5O75915 188 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 RRAS2P62070 204 aaPredicted RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 BIKQ13323 160 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 SNTA1Q13424 505 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 LY6G5CQ5SRR4 150 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 HSD11B1LQ7Z5J1 315 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 RBM45Q8IUH3 476 aaKnown RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 COX18Q8N8Q8 333 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 LSM14AQ8ND56 463 aaKnown RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 SLC38A5Q8WUX1 472 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 ZNF480Q8WV37 535 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 SPRYD4Q8WW59 207 aaPredicted RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 MS4A4AQ96JQ5 239 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 PITX2Q99697 317 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 GABARAPL3Q9BY60 117 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 TCF7L1Q9HCS4 588 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 ACER3Q9NUN7 267 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 MED11Q9P086 117 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 WDR45Q9Y484 360 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 LEFTY2O00292 366 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 AKR7A2O43488 359 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 EDNRAP25101 427 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 GRK5P34947 590 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 NUP62P37198 522 aaPredicted RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 MAGEA2P43356 314 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 CSNK1DP48730 415 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 PSMA6P60900 246 aaKnown RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 GLCCI1Q86VQ1 547 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 KIF18BQ86Y91 864 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 NRMQ8IXM6 262 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 WFDC5Q8TCV5 224 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 OVCA2Q8WZ82 227 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 TAS2R10Q9NYW0 307 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 NDRG2Q9UN36 371 aaKnown RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 B4DXG7 233 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 ZNF10P21506 573 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 FNTBP49356 437 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 PFN3P60673 137 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 SP3Q02447 781 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 ZNHIT3Q15649 155 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 C4orf46Q504U0 113 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 TMEM107Q6UX40 140 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 OAFQ86UD1 273 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 TRAM1L1Q8N609 369 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 OR8K5Q8NH50 307 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 RIPOR3Q96MK2 946 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 CXXC1Q9P0U4 656 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 MGAT4CQ9UBM8 478 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 TBC1D24Q9ULP9 559 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 ACVR2AP27037 513 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 GIFP27352 417 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 HOXD11P31277 338 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 ZNF362Q5T0B9 420 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 SLX4IPQ5VYV7 408 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 UNC5DQ6UXZ4 953 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 PGBD3Q8N328 593 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 TRMT10AQ8TBZ6 339 aaKnown RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 ZNF354BQ96LW1 612 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 OPALINQ96PE5 141 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 RBCK1Q9BYM8 510 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 KLHL31Q9H511 634 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 MRPS30Q9NP92 439 aaKnown RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 TMEM39AQ9NV64 488 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 DEC1Q9P2X7 70 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 PRKYO43930 277 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 SERPINA3P01011 423 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 PRKCAP17252 672 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 MLLT3P42568 568 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 CSRP3P50461 194 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 VSX2P58304 361 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 FCN2Q15485 313 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 ODF4Q2M2E3 257 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 MORN1Q5T089 497 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 POMZP3Q6PJE2 187 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 CCDC190Q86UF4 302 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 TMEM25Q86YD3 366 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 DCUN1D3Q8IWE4 304 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 CLDN22Q8N7P3 220 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 BBS10Q8TAM1 723 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 ADAMTS19Q8TE59 1207 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 COQ10AQ96MF6 247 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 OR2A14Q96R47 310 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 TREX2Q9BQ50 279 aaPredicted RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 OR10A4Q9H209 315 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 OR51J1Q9H342 316 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 DDX31Q9H8H2 851 aaKnown RBP9.97□□□□□ -0.81
USB1-212ENST00000566082 NLGN3Q9NZ94 848 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 GNG8Q9UK08 70 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 NEU3Q9UQ49 428 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 RASD1Q9Y272 281 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 CDH10Q9Y6N8 788 aa9.97□□□□□ -0.81
USB1-212ENST00000566082 DUXAA6NLW8 204 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 ANXA2P2A6NMY6 339 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 H0YIV9 168 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 TEX28O15482 410 aa9.96□□□□□ -0.81
USB1-212ENST00000566082 RGS9O75916 674 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms