RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TSTQ16762 297 aaKnown RBP16.41■□□□□ 0.22
PTPN21-208ENST00000556564 OLFML2AQ68BL7 652 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 OPN1LWP04000 364 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 CLCN2P51788 898 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 PRDX1Q06830 199 aaKnown RBP16.41■□□□□ 0.22
PTPN21-208ENST00000556564 LRIF1Q5T3J3 769 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 KIAA1614Q5VZ46 1190 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 RCBTB1Q8NDN9 531 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 PIK3R3Q92569 461 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 MYEOVQ96EZ4 313 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 NANSQ9NR45 359 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 ANKRD31Q8N7Z5 1873 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 GJE1A6NN92 205 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 H2BFMP0C1H6 154 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 DCTN2Q13561 401 aaKnown RBP16.41■□□□□ 0.22
PTPN21-208ENST00000556564 CCSAPQ6IQ19 270 aaPredicted RBP16.41■□□□□ 0.22
PTPN21-208ENST00000556564 C1orf216Q8TAB5 229 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 TAS2R7Q9NYW3 318 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 RAB36O95755 333 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 EIF2B2P49770 351 aaKnown RBP16.41■□□□□ 0.22
PTPN21-208ENST00000556564 DCDC1P59894 354 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 RGNQ15493 299 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 OR2T33Q8NG76 320 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 TMEM80Q96HE8 168 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 MRGPRX1Q96LB2 322 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 ZFP3Q96NJ6 502 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 PITHD1Q9GZP4 211 aaPredicted RBP16.41■□□□□ 0.22
PTPN21-208ENST00000556564 DHCR7Q9UBM7 475 aaKnown RBP16.41■□□□□ 0.22
PTPN21-208ENST00000556564 TBX10O75333 385 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 PENKP01210 267 aaPredicted RBP16.4■□□□□ 0.22
PTPN21-208ENST00000556564 PRKCAP17252 672 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 SDC1P18827 310 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 ACADVLP49748 655 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 RCAN2Q14206 197 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 KIAA1211LQ6NV74 962 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 FIP1L1Q6UN15 594 aaKnown RBP16.4■□□□□ 0.22
PTPN21-208ENST00000556564 OR1E3Q8WZA6 343 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 SLC41A3Q96GZ6 507 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 TXLNGYQ9BZA5 131 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 HHATLQ9HCP6 504 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 APOL3O95236 402 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 CSN2P05814 226 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 CD36P16671 472 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 TMEM184AQ6ZMB5 413 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 ZSWIM9Q86XI8 627 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 FCGR1BQ92637 280 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 CCDC74AQ96AQ1 378 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 HS6ST2Q96MM7 605 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 KAT8Q9H7Z6 458 aaKnown RBP16.4■□□□□ 0.22
PTPN21-208ENST00000556564 H6PDO95479 791 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 CD63P08962 238 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 PAX7P23759 505 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 SMCO1Q147U7 214 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 CDRT4Q8N9R6 151 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 NTMT1Q9BV86 223 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 QSER1Q2KHR3 1735 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 A0A1W2PRQ8 180 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
PTPN21-208ENST00000556564 DCDP81605 110 aaKnown RBP16.4■□□□□ 0.22
PTPN21-208ENST00000556564 SEMA3BQ13214 749 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 ARFRP1Q13795 201 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 CBFBQ13951 182 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 SLC15A3Q8IY34 581 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 OR8K3Q8NH51 312 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 PLA2G2FQ9BZM2 168 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 GKN3PP0CG01 181 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 ACPPP15309 386 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 HSD11B2P80365 405 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 GALK2Q01415 458 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 SCN1BQ07699 218 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 VTCN1Q7Z7D3 282 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 TBC1D20Q96BZ9 403 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 CXorf21Q9HAI6 301 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 KLHL42Q9P2K6 505 aa16.4■□□□□ 0.22
PTPN21-208ENST00000556564 NKX1-2Q9UD57 310 aaPredicted RBP16.4■□□□□ 0.22
PTPN21-208ENST00000556564 RGPD4Q7Z3J3 1758 aa16.39■□□□□ 0.22
PTPN21-208ENST00000556564 HIST1H1TP22492 207 aaPredicted RBP16.39■□□□□ 0.22
PTPN21-208ENST00000556564 TFF2Q03403 129 aa16.39■□□□□ 0.22
PTPN21-208ENST00000556564 TAZQ16635 292 aa16.39■□□□□ 0.22
PTPN21-208ENST00000556564 SLC36A3Q495N2 470 aa16.39■□□□□ 0.22
PTPN21-208ENST00000556564 C14orf28Q4W4Y0 310 aa16.39■□□□□ 0.22
PTPN21-208ENST00000556564 OR5M10Q6IEU7 315 aa16.39■□□□□ 0.22
PTPN21-208ENST00000556564 IL20RBQ6UXL0 311 aa16.39■□□□□ 0.22
PTPN21-208ENST00000556564 F10P00742 488 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 TGFBR2P37173 567 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 GMFBP60983 142 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 DCST2Q5T1A1 773 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 Q6ZS52 159 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 CDX2Q99626 313 aaPredicted RBP16.39■□□□□ 0.21
PTPN21-208ENST00000556564 TAF4O00268 1085 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 RHCEP18577 417 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 EPHA4P54764 986 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 UBE2NP61088 152 aaKnown RBP16.39■□□□□ 0.21
PTPN21-208ENST00000556564 USP43Q70EL4 1123 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 POLR2AP24928 1970 aaKnown RBP16.39■□□□□ 0.21
PTPN21-208ENST00000556564 GABRR3A8MPY1 467 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 SHQ1Q6PI26 577 aaKnown RBP16.39■□□□□ 0.21
PTPN21-208ENST00000556564 QSOX2Q6ZRP7 698 aa16.39■□□□□ 0.21
PTPN21-208ENST00000556564 CROCCP3Q8IVE0 287 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms