RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 NXF3Q9H4D5 531 aaKnown RBP2.5□□□□□ -2.01
SCFD1-219ENST00000556413 MINDY3Q9H8M7 445 aa2.5□□□□□ -2.01
SCFD1-219ENST00000556413 PHPT1Q9NRX4 125 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-219ENST00000556413 TMEM161AQ9NX61 479 aa2.5□□□□□ -2.01
SCFD1-219ENST00000556413 SPG21Q9NZD8 308 aa2.5□□□□□ -2.01
SCFD1-219ENST00000556413 TXNDC16Q9P2K2 825 aa2.5□□□□□ -2.01
SCFD1-219ENST00000556413 WRAP73Q9P2S5 460 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-219ENST00000556413 KLK11Q9UBX7 282 aa2.5□□□□□ -2.01
SCFD1-219ENST00000556413 PILRAQ9UKJ1 303 aa2.5□□□□□ -2.01
SCFD1-219ENST00000556413 NDRG2Q9UN36 371 aaKnown RBP2.5□□□□□ -2.01
SCFD1-219ENST00000556413 ZDBF2Q9HCK1 2354 aa2.5□□□□□ -2.01
SCFD1-219ENST00000556413 CLUHO75153 1309 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 BAZ2BQ9UIF8 2168 aaKnown RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 KIAA1217Q5T5P2 1943 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 IGLV3-22A0A075B6J6 115 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 MSH4O15457 936 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 SLC37A4O43826 429 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 GIG44P09565 113 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 MYBL1P10243 752 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 U2AF2P26368 475 aaKnown RBP eCLIP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 RAB28P51157 221 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 HNRNPA3P51991 378 aaKnown RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 CRYBB1P53674 252 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 ARPP19P56211 112 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 KYNUQ16719 465 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 TMEM44Q2T9K0 475 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 LBHQ53QV2 105 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 TCEAL6Q6IPX3 200 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 RPUSD3Q6P087 351 aaKnown RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 CYB5D1Q6P9G0 228 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 CATSPER4Q7RTX7 472 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 MIER3Q7Z3K6 550 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 CPEB2Q7Z5Q1 589 aaKnown RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 TTC30BQ8N4P2 665 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 GBP7Q8N8V2 638 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 MRPL43Q8N983 215 aaKnown RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 OR9Q2Q8NGE9 314 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 FGF14Q92915 247 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 TCEAL3Q969E4 200 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 TSACCQ96A04 125 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-219ENST00000556413 HDAC11Q96DB2 347 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 NEDD4LQ96PU5 975 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 FTHL17Q9BXU8 183 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 PLA2G2FQ9BZM2 168 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 ACTL8Q9H568 366 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 MOB1AQ9H8S9 216 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 MARCH7Q9H992 704 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 IL17CQ9P0M4 197 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 DUSP12Q9UNI6 340 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 AUP1Q9Y679 476 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 PIEZO1Q92508 2521 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 FRYLO94915 3013 aa2.49□□□□□ -2.01
SCFD1-219ENST00000556413 CFAP47Q6ZTR5 3102 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 MYH7BA7E2Y1 1941 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 NFASCO94856 1347 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 RALGAPA2Q2PPJ7 1873 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 NCOR1O75376 2440 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 RALGAPA1Q6GYQ0 2036 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 GPR179Q6PRD1 2367 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 TRGV8A0A0C4DH27 118 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 hCG_38984A0A1B0GV85 526 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 C17orf105B2RV13 164 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 HIP1O00291 1037 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 STAM2O75886 525 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 STBD1O95210 358 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 C9P02748 559 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 FYNP06241 537 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 OR4Q2P0C623 313 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 CD59P13987 128 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 C4BPBP20851 252 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 BRCC3P46736 316 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 OSTNP61366 133 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 SPAG1Q07617 926 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 HTR4Q13639 388 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 EMC2Q15006 297 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 SF3A2Q15428 464 aaKnown RBP2.48□□□□□ -2.01
SCFD1-219ENST00000556413 MLF2Q15773 248 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-219ENST00000556413 FGD3Q5JSP0 725 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 ZNF506Q5JVG8 444 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 FUT10Q6P4F1 479 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 EMBQ6PCB8 327 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 DCLRE1AQ6PJP8 1040 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 NHLRC1Q6VVB1 395 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 Q6ZS52 159 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 PCGF5Q86SE9 256 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 FAM219AQ8IW50 185 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 UBALD2Q8IYN6 164 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 APCDD1Q8J025 514 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 KIAA1524Q8TCG1 905 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 URGCPQ8TCY9 931 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 TBCKQ8TEA7 893 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 NABP1Q96AH0 204 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 TCEAL4Q96EI5 215 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 CDHR1Q96JP9 859 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 JAKMIP1Q96N16 626 aaKnown RBP2.48□□□□□ -2.01
SCFD1-219ENST00000556413 TEKT3Q9BXF9 490 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 STRADBQ9C0K7 418 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 RWDD1Q9H446 243 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-219ENST00000556413 HEBP1Q9NRV9 189 aa2.48□□□□□ -2.01
SCFD1-219ENST00000556413 BCCIPQ9P287 314 aaKnown RBP eCLIP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms