RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 SAA4P35542 130 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 PTGER3P43115 390 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 SGSHP51688 502 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 VCPP55072 806 aaKnown RBP3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 RAG2P55895 527 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 HERVK_113P63132 956 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 ERVK-8P63133 956 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 CYLC2Q14093 348 aaPredicted RBP3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 SMC1AQ14683 1233 aaKnown RBP3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 ZNF528Q3MIS6 628 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 RAET1GQ6H3X3 334 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 IRGCQ6NXR0 463 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 RFWD3Q6PCD5 774 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 AMZ2Q86W34 360 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 ZNF397Q8NF99 534 aaPredicted RBP3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 OR56B1Q8NGI3 324 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 NCLNQ969V3 563 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 BIRC7Q96CA5 298 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 NTNG2Q96CW9 530 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 FAM173AQ9BQD7 235 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 RPP25Q9BUL9 199 aaKnown RBP3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 ERVK-6Q9BXR3 956 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 IL20RAQ9UHF4 553 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 CSAG2Q9Y5P2 127 aa3.65□□□□□ -1.83
SMNDC1-205ENST00000477763 TRIM49BA6NDI0 452 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 NPIPA2E9PIF3 369 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 LGALS8O00214 317 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 RANBP6O60518 1105 aaKnown RBP3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 PDE5AO76074 875 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 STK17BO94768 372 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 HPP00738 406 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 RENP00797 406 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 SLC35G4P0C7Q5 338 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 ELK3P41970 407 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 MFAP2P55001 183 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 DSCR10P59022 87 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 SRYQ05066 204 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 COX10Q12887 443 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 KARSQ15046 597 aaKnown RBP3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 CD226Q15762 336 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 ZSWIM7Q19AV6 140 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 ACSF3Q4G176 576 aaPredicted RBP3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 NHLRC3Q5JS37 347 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 LEMD1Q68G75 181 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 ATRAIDQ6UW56 229 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 ADCK1Q86TW2 530 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 CENPSQ8N2Z9 138 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 FGFRL1Q8N441 504 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 OR52J3Q8NH60 311 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 WDR36Q8NI36 951 aaKnown RBP3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 DQX1Q8TE96 717 aaKnown RBP3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 DLX4Q92988 240 aaPredicted RBP3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 LHX4Q969G2 390 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 TTYH2Q9BSA4 534 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 WRAP53Q9BUR4 548 aaKnown RBP3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 APOOQ9BUR5 198 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 ALG9Q9H6U8 611 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 AMBNQ9NP70 447 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 STARD5Q9NSY2 213 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 SOHLH2Q9NX45 425 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 MLXQ9UH92 298 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 FZR1Q9UM11 496 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 SMAD5-AS1Q9Y6J3 95 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 CLCA3PQ9Y6N3 262 aa3.64□□□□□ -1.83
SMNDC1-205ENST00000477763 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 PDLIM1O00151 329 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 E2F3O00716 465 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 TYROBPO43914 113 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 DNAJB1P25685 340 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 RPA1P27694 616 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 CCND2P30279 289 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 CHRNA3P32297 505 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 ARHGDIAP52565 204 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 IL9RQ01113 521 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 ZFP36L1Q07352 338 aaKnown RBP3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 CRMP1Q14194 572 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 ABRAXAS2Q15018 415 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 ZNF699Q32M78 642 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 LRIT3Q3SXY7 679 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 C14orf28Q4W4Y0 310 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 LINC00242Q5T6M2 205 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 P4HA3Q7Z4N8 544 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 TSEN54Q7Z6J9 526 aaKnown RBP3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 HIPK1Q86Z02 1210 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 ZNF491Q8N8L2 437 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 FLVCR1-AS1Q8TAF5 88 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 TBCKQ8TEA7 893 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 ITLN1Q8WWA0 313 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 TRIM9Q9C026 710 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 TSPY26PQ9H489 355 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 ESM1Q9NQ30 184 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 RAI14Q9P0K7 980 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 SENP1Q9P0U3 644 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 ACTR3BQ9P1U1 418 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 PURGQ9UJV8 347 aaKnown RBP3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 RNF24Q9Y225 148 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 DHRS7Q9Y394 339 aa3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 TP53BP1Q12888 1972 aaPredicted RBP3.63□□□□□ -1.83
SMNDC1-205ENST00000477763 LRIT2A6NDA9 550 aa3.62□□□□□ -1.83
SMNDC1-205ENST00000477763 TRABD2BA6NFA1 517 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms