RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 UBASH3BQ8TF42 649 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 NELFBQ8WX92 580 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 GFM2Q969S9 779 aaKnown RBP5.72□□□□□ -1.49
HDAC3-206ENST00000471968 APOL2Q9BQE5 337 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 FERMT1Q9BQL6 677 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 TSSK1BQ9BXA7 367 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 STK33Q9BYT3 514 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 FAM129AQ9BZQ8 928 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 CLK4Q9HAZ1 481 aaKnown RBP5.72□□□□□ -1.49
HDAC3-206ENST00000471968 GALNT9Q9HCQ5 603 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 PLEK2Q9NYT0 353 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 MCM8Q9UJA3 840 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 DKKL1Q9UK85 242 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 GRID1Q9ULK0 1009 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 EXO1Q9UQ84 846 aaKnown RBP5.72□□□□□ -1.49
HDAC3-206ENST00000471968 CTNND2Q9UQB3 1225 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 HEY1Q9Y5J3 304 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ZNF839A8K0R7 811 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 F8W8V4 182 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 M0R1B8 84 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 HRKO00198 91 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 SLC16A8O95907 504 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 F13BP05160 661 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 ERCC1P07992 297 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-206ENST00000471968 ENO3P13929 434 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-206ENST00000471968 UCHL3P15374 230 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 FERP16591 822 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 HRH2P25021 359 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 AOAHP28039 575 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 SRD5A2P31213 254 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 CLDN20P56880 219 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 LMO4P61968 165 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 RGS1Q08116 209 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 ARHGAP19Q14CB8 494 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 RPS6KA1Q15418 735 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF311Q5JNZ3 666 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 CCDC181Q5TID7 509 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 MFSD12Q6NUT3 480 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 KLHL17Q6TDP4 642 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 TFAP2EQ6VUC0 442 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 SLC29A4Q7RTT9 530 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 SPATA19Q7Z5L4 167 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 EXOC3L1Q86VI1 746 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF595Q8IYB9 648 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 ZCCHC24Q8N2G6 241 aaKnown RBP5.71□□□□□ -1.5
HDAC3-206ENST00000471968 PQLC3Q8N755 202 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 WDSUB1Q8N9V3 476 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 ADAMTS15Q8TE58 950 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF480Q8WV37 535 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 NEU4Q8WWR8 484 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-206ENST00000471968 SENP5Q96HI0 755 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-206ENST00000471968 MAP6Q96JE9 813 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 PANX2Q96RD6 677 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 WWTR1Q9GZV5 400 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 RACGAP1Q9H0H5 632 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 TOR3AQ9H497 397 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 FKRPQ9H9S5 495 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 FBXL2Q9UKC9 423 aa5.71□□□□□ -1.5
HDAC3-206ENST00000471968 MRPS33Q9Y291 106 aaKnown RBP5.71□□□□□ -1.5
HDAC3-206ENST00000471968 SOX21Q9Y651 276 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-206ENST00000471968 PKHD1P08F94 4074 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 MDFIC2A0A1B0GVS7 189 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 BICDL2A1A5D9 508 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 OR51F1A6NGY5 319 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 E9PQ18 207 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 H0YL77 283 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 MYO1CO00159 1063 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 GPR37O15354 613 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 ICOSLGO75144 302 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 CDH16O75309 829 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 IGKV3-11P04433 115 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 TUBBP07437 444 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 CDK11BP21127 795 aaKnown RBP5.7□□□□□ -1.5
HDAC3-206ENST00000471968 FUT4P22083 530 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 AGTR1P30556 359 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 GPC1P35052 558 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 GJC1P36383 396 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 SERPINF1P36955 418 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 MTNR1AP48039 350 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 PPOXP50336 477 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 B3GALT5-AS1P59052 145 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 KRTAP10-11P60412 298 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 RPS3AP61247 264 aaKnown RBP5.7□□□□□ -1.5
HDAC3-206ENST00000471968 ID2Q02363 134 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 SLC25A11Q02978 314 aaKnown RBP5.7□□□□□ -1.5
HDAC3-206ENST00000471968 CHRNEQ04844 493 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 MPP3Q13368 585 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 PWP1Q13610 501 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 CUL4AQ13619 759 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 TIMM23BQ5SRD1 257 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 RNF111Q6ZNA4 994 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 TBC1D1Q86TI0 1168 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-206ENST00000471968 CNTN4Q8IWV2 1026 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 PRR22Q8IZ63 422 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 DOK4Q8TEW6 326 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 SLC47A1Q96FL8 570 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 CARD6Q9BX69 1037 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 OSBPL11Q9BXB4 747 aa5.7□□□□□ -1.5
HDAC3-206ENST00000471968 MS4A7Q9GZW8 240 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms