RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	EHD3	Q9NZN3	535 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	COPS7A	Q9UBW8	275 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	FETUB	Q9UGM5	382 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	FBXL2	Q9UKC9	423 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	EFR3B	Q9Y2G0	817 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651		A0A1W2PP18	115 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651		E7EVH7	732 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TCF21	O43680	179 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KIAA0513	O60268	411 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	AQP8	O94778	261 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GAS8	O95995	478 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CT62	P0C5K7	136 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PAM	P19021	973 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CNTF	P26441	200 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GDF5	P43026	501 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	STT3A	P46977	705 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PCYT1A	P49585	367 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	HADHB	P55084	474 aa	Known RBP	7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CDKN2D	P55273	166 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	UBASH3A	P57075	661 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	C21orf58	P58505	322 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	B3GALT5-AS1	P59052	145 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	IGLV3-21	P80748	117 aa	Predicted RBP	7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SNX1	Q13596	522 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RPS6KA2	Q15349	733 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GUSBP1	Q15486	140 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OASL	Q15646	514 aa	Known RBP	7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NNAT	Q16517	81 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CR1L	Q2VPA4	569 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TTLL9	Q3SXZ7	439 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF672	Q499Z4	452 aa	Predicted RBP	7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MIDN	Q504T8	468 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RBM20	Q5T481	1227 aa	Known RBP	7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	C18orf63	Q68DL7	685 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	DUPD1	Q68J44	220 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF470	Q6ECI4	717 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR5M10	Q6IEU7	315 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NIPAL1	Q6NVV3	410 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ADAM5	Q6NVV9	412 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NEPRO	Q6NW34	567 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LUZP1	Q86V48	1076 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	THOC6	Q86W42	341 aa	Known RBP	7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RNF175	Q8N4F7	328 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR5M1	Q8NGP8	315 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR1J4	Q8NGS1	313 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SGMS2	Q8NHU3	365 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	FNDC9	Q8TBE3	224 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TMEM41A	Q96HV5	264 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SLC39A3	Q9BRY0	314 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR2B2	Q9GZK3	357 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	IFNK	Q9P0W0	207 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SLC22A14	Q9Y267	594 aa		7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
NIF3L1-206	ENST00000416651	DPRX	A6NFQ7	191 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	URAD	A6NGE7	173 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SLC22A20	A6NK97	555 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ERI2	A8K979	691 aa	Known RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ZIC3	O60481	467 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TMCC2	O75069	709 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ICOSLG	O75144	302 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NME6	O75414	186 aa	Predicted RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TJP3	O95049	919 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ABCB1	P08183	1280 aa	Predicted RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ENO3	P13929	434 aa	Predicted RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	OGN	P20774	298 aa	Known RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FDFT1	P37268	417 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SLC1A2	P43004	574 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SLC6A8	P48029	635 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NUDT6	P53370	316 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	DOC2A	Q14183	400 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SLBP	Q14493	270 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ADPRM	Q3LIE5	342 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FBXO48	Q5FWF7	155 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NCMAP	Q5T1S8	102 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C11orf63	Q6NUN7	778 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TRIM40	Q6P9F5	258 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CAND1	Q86VP6	1230 aa	Known RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PLD6	Q8N2A8	252 aa	Known RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C3orf56	Q8N813	242 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BANP	Q8N9N5	519 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SEMA6D	Q8NFY4	1073 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	OR2L5	Q8NG80	312 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C10orf105	Q8TEF2	133 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C1orf54	Q8WWF1	131 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	KCNJ9	Q92806	393 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	HGD	Q93099	445 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C3orf49	Q96BT1	292 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C11orf24	Q96F05	449 aa	Predicted RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	LINGO1	Q96FE5	620 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FBXL20	Q96IG2	436 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	DGAT2	Q96PD7	388 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SERINC2	Q96SA4	455 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	AIF1L	Q9BQI0	150 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BPIFA3	Q9BQP9	254 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CACNG6	Q9BXT2	260 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ACTR6	Q9GZN1	396 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PELI2	Q9HAT8	420 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NPHS2	Q9NP85	383 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ARL15	Q9NXU5	204 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ZNF490	Q9ULM2	529 aa	Predicted RBP	7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms