RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 OclnQ61146 521 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Rab39aQ8BHD0 217 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Vmn1r198Q8R263 300 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Commd4Q9CQ02 199 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tspan4Q9DCK3 238 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 B3galt5Q9JI67 308 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Plod2Q9R0B9 737 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tsc2Q61037 1814 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Spaca5A2AE20 160 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr605E9Q838 314 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Pbx2O35984 430 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 TrhrP21761 393 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Xrra1Q3U3V8 786 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr352Q8VGJ9 315 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Dbx2F8VQH7 377 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P01670 111 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P01671 111 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P01672 111 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tas2r7P59530 312 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Dmrtc1bQ2PMX6 267 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Pin1rt1Q3ULQ2 159 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Nipal3Q8BGN5 410 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 GatcQ8CBY0 155 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Aoc1Q8JZQ5 751 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr448Q8VES9 310 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr96Q8VFE3 313 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr986Q8VFN6 312 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Mocs2Q9Z223 189 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Myo7aP97479 2215 aa14.83□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ube2ql1A0PJN4 161 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Mterf1bB9EJ57 379 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm5798F7BTS7 198 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Bard1O70445 765 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Polr1dP97304 133 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 ScapQ6GQT6 1276 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ncs1Q8BNY6 190 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 BC024139Q8BVJ3 772 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cdt1Q8R4E9 557 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tnfsf13Q9D777 241 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Csnk1dQ9DC28 415 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Togaram1Q6A070 1776 aaKnown RBP14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 A430033K04RikE9Q8G5 680 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Vmn1r12G5E8G1 307 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 ClppO88696 272 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 GzmcP08882 248 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 TtlP38585 377 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 TesP47226 423 aaKnown RBP14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Yes1Q04736 541 aaKnown RBP14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Lgals3bpQ07797 577 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 InavaQ7TN12 663 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr1252Q7TQZ2 314 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 C2cd4bQ80XU5 340 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 AjubaQ91XC0 547 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 D6Wsu163eQ91YN0 552 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Mthfd1Q922D8 935 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Pno1Q9CPS7 248 aaKnown RBP14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Arr3Q9EQP6 381 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ggta1l1A2AUQ7 319 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr640E9Q7P5 314 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Vmn1r25H3BLP0 302 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 P04213 122 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tyrp1P07147 537 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tbc1d24Q3UUG6 561 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tas2r140Q7TQA4 312 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Coq4Q8BGB8 266 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gpr158Q8C419 1200 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Sphk1Q8CI15 382 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr1391Q8VFA4 311 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Edem1Q925U4 652 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tex47Q9D5W8 253 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Xpr1Q9Z0U0 695 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 B4galt2Q9Z2Y2 369 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 KantrA0A1W2P7I0 76 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gm10718D3Z1I7 227 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Kbtbd6E9PYD7 486 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Kbtbd7G5E8C2 690 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Vmn2r12L7N217 831 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 SmsP97355 366 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Lmf1Q3U3R4 574 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Spag8Q3V0Q6 470 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Vdac3Q60931 283 aaKnown RBP14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Ppp3r1Q63810 170 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 GalpQ810H5 117 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Fam3cQ91VU0 227 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Klhdc8aQ91XA8 350 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cacng3Q9JJV5 315 aa14.82□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 1700028J19RikA0A0U1RP08 172 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 TyrP11344 533 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Nup43P59235 380 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Xrcc1Q60596 631 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Naa50Q6PGB6 169 aaKnown RBP14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Itpk1Q8BYN3 419 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Rnf111Q99ML9 989 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Tpra1Q99MU1 369 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Mrpl15Q9CPR5 295 aaKnown RBP14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Gtf2e2Q9D902 292 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Il1rl2Q9ERS7 574 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 ClpxQ9JHS4 634 aaKnown RBP14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zbp1Q9QY24 411 aa14.81□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Clec2iQ9WVF9 217 aa14.81□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms