RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PEX12O00623 359 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 MRASO14807 208 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 KCNH1O95259 989 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 HPP00738 406 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 HOXB9P17482 250 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 SLC26A5P58743 744 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 TRMT12Q53H54 448 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 DLEU7Q6UYE1 221 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 TRIML2Q8N7C3 387 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 OR7G1Q8NGA0 311 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 SFXN5Q8TD22 340 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 DOK4Q8TEW6 326 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 ZNF721Q8TF20 911 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 MOAP1Q96BY2 351 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 RCN3Q96D15 328 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 FAM120BQ96EK7 910 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 ARHGAP9Q9BRR9 750 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 CNPPD1Q9BV87 410 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 C3orf14Q9HBI5 128 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 SLAMF8Q9P0V8 285 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 FBXL4Q9UKA2 621 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 RALYQ9UKM9 306 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 C19orf53Q9UNZ5 99 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 ERVK-19Q9WJR5 959 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 SNX8Q9Y5X2 465 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 NSG1A0A0A6YYJ2 146 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 UPK1AO00322 258 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 EMC8O43402 210 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 BCAS2O75934 225 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 CBX6O95503 412 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 CBX7O95931 251 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 NPPAP01160 153 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 UQCRC2P22695 453 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 GAB1Q13480 694 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 ATP1A4Q13733 1029 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 EXT1Q16394 746 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 LINC00303Q3SY05 128 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 PLAG1Q6DJT9 500 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 DNAJC14Q6Y2X3 702 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 APCDD1LQ8NCL9 501 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 OR1N1Q8NGS0 311 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 NSL1Q96IY1 281 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 UBL7Q96S82 380 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 NPAS2Q99743 824 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 SEMA4CQ9C0C4 833 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 OR8D2Q9GZM6 311 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 EFCAB1Q9HAE3 211 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 SLC6A13Q9NSD5 602 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 DDX18Q9NVP1 670 aaKnown RBP18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 KCNMB2Q9Y691 235 aa18.46■□□□□ 0.54
PDLIM2-221ENST00000622702 PIEZO2Q9H5I5 2752 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 TRBV5-3A0A0A0MS03 114 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 UBOX5O94941 541 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 PSMG1O95456 288 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 ANP32DO95626 131 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 CLPSP04118 112 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 GSNP06396 782 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 SSTR4P31391 388 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 SOAT1P35610 550 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 CCT3P49368 545 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 MNAT1P51948 309 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 PRR5P85299 388 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 NFYCQ13952 458 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 TRMT5Q32P41 509 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 ZNF621Q6ZSS3 439 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 DHDDSQ86SQ9 333 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 ZNF615Q8N8J6 731 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 OR56A1Q8NGH5 318 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 APOBEC4Q8WW27 367 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 ANKRA2Q9H9E1 313 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 COPS7AQ9UBW8 275 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 PCDHB14Q9Y5E9 798 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 PCSK5Q92824 1860 aa18.45■□□□□ 0.54
PDLIM2-221ENST00000622702 RNF103-CHMP3A0A140T963 221 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 ARGFXA6NJG6 315 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 AIM2O14862 343 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 PRAMEF2O60811 474 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 COQ9O75208 318 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 T-ENOLP0DO92 83 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 ESRRAP11474 423 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 ICAM2P13598 275 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 CALB2P22676 271 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 SLC37A1P57057 533 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 DUSP8Q13202 625 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 SPDYE7PQ495Y7 208 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 GTDC1Q4AE62 458 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 BHLHB9Q6PI77 547 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 PCSK4Q6UW60 755 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 HACD2Q6Y1H2 254 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 MSRB3Q8IXL7 192 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 ZNF321PQ8N8H1 164 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 SIMC1Q8NDZ2 872 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 M1APQ8TC57 530 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 NCLNQ969V3 563 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 ROPN1LQ96C74 230 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 VMP1Q96GC9 406 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 NUDT9Q9BW91 350 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 OR10A5Q9H207 317 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 EPS8L2Q9H6S3 715 aa18.44■□□□□ 0.54
PDLIM2-221ENST00000622702 ZNF160Q9HCG1 818 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms