RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 CCDC144AA2RUR9 1427 aa0.6□□□□□ -2.31
CEP290-208ENST00000604024 USP6P35125 1406 aa0.6□□□□□ -2.31
CEP290-208ENST00000604024 SMG6Q86US8 1419 aaKnown RBP0.6□□□□□ -2.31
CEP290-208ENST00000604024 UGGT2Q9NYU1 1516 aa0.6□□□□□ -2.31
CEP290-208ENST00000604024 TIAM1Q13009 1591 aa0.6□□□□□ -2.31
CEP290-208ENST00000604024 IQGAP1P46940 1657 aa0.6□□□□□ -2.31
CEP290-208ENST00000604024 ROBO1Q9Y6N7 1651 aa0.6□□□□□ -2.31
CEP290-208ENST00000604024 COL5A1P20908 1838 aaPredicted RBP0.6□□□□□ -2.31
CEP290-208ENST00000604024 CUL9Q8IWT3 2517 aa0.6□□□□□ -2.31
CEP290-208ENST00000604024 ARHGEF28Q8N1W1 1705 aaKnown RBP0.59□□□□□ -2.31
CEP290-208ENST00000604024 DNMT1P26358 1616 aaKnown RBP0.59□□□□□ -2.31
CEP290-208ENST00000604024 PZPP20742 1482 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 CNTNAP1P78357 1384 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 TMEM94Q12767 1356 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 PNPLA6Q8IY17 1366 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 PLEKHG1Q9ULL1 1385 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 NPIPA5A0A0B4J1W7 369 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 ANKRD18BA2A2Z9 1011 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 NKX2-6A6NCS4 301 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 NPIPA5E9PKD4 350 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 WWP2O00308 870 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 DIAPH2O60879 1101 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 IGFBP3P17936 291 aaPredicted RBP0.59□□□□□ -2.31
CEP290-208ENST00000604024 NNMTP40261 264 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 EIF2DP41214 584 aaKnown RBP0.59□□□□□ -2.31
CEP290-208ENST00000604024 CSNK1DP48730 415 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 NAGLUP54802 743 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 PEX3P56589 373 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 CEACAM7Q14002 265 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 LETM2Q2VYF4 491 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 FAM71E1Q6IPT2 247 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 LINC01551Q86U37 167 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 PRPF39Q86UA1 669 aaKnown RBP0.59□□□□□ -2.31
CEP290-208ENST00000604024 PPP1R27Q86WC6 154 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 UNC5CLQ8IV45 518 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 LINC00346Q8IVM7 164 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 VCXQ9H320 206 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 SUPT6HQ7KZ85 1726 aaKnown RBP0.59□□□□□ -2.31
CEP290-208ENST00000604024 TET3O43151 1660 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 RREB1Q92766 1687 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 BIRC6Q9NR09 4857 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 LAMC1P11047 1609 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 USP32Q8NFA0 1604 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 CICQ96RK0 1608 aaPredicted RBP0.59□□□□□ -2.31
CEP290-208ENST00000604024 SLIT2O94813 1529 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 EFCAB6Q5THR3 1501 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 BCL9O00512 1426 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 PLCH2O75038 1416 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 CLIP1P30622 1438 aa0.59□□□□□ -2.31
CEP290-208ENST00000604024 RRBP1Q9P2E9 1410 aaKnown RBP0.59□□□□□ -2.31
CEP290-208ENST00000604024 A0A0U1RQS6 177 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 GTPBP10A4D1E9 387 aaKnown RBP0.59□□□□□ -2.32
CEP290-208ENST00000604024 TMEM150BA6NC51 233 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 FLRT2O43155 660 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 MLNRO43193 412 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 DOK2O60496 412 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 SEMG1P04279 462 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 TOP1P11387 765 aaKnown RBP0.59□□□□□ -2.32
CEP290-208ENST00000604024 GABPAQ06546 454 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 MSLNQ13421 630 aaPredicted RBP0.59□□□□□ -2.32
CEP290-208ENST00000604024 SF3A2Q15428 464 aaKnown RBP0.59□□□□□ -2.32
CEP290-208ENST00000604024 GLYR1Q49A26 553 aaPredicted RBP0.59□□□□□ -2.32
CEP290-208ENST00000604024 RILPL1Q5EBL4 403 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 CST9LP1Q5W188 147 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 SULT1C3Q6IMI6 304 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 KRT80Q6KB66 452 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 IL34Q6ZMJ4 242 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 C11orf57Q6ZUT1 292 aaPredicted RBP0.59□□□□□ -2.32
CEP290-208ENST00000604024 DEFB132Q7Z7B7 95 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 SIX6OS1Q8N1H7 587 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 UBTD2Q8WUN7 234 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 INPP5EQ9NRR6 644 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 RNF115Q9Y4L5 304 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 ABCA3Q99758 1704 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 KDM5AP29375 1690 aaKnown RBP0.59□□□□□ -2.32
CEP290-208ENST00000604024 TMEM131LA2VDJ0 1609 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 HECW1Q76N89 1606 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 SAMD9Q5K651 1589 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 SAMD9LQ8IVG5 1584 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 SLIT1O75093 1534 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 ABCC1P33527 1531 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 MAP3K1Q13233 1512 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 SYCP2Q9BX26 1530 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 GPATCH8Q9UKJ3 1502 aaKnown RBP0.59□□□□□ -2.32
CEP290-208ENST00000604024 A2MP01023 1474 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 NCOA2Q15596 1464 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 HFM1A2PYH4 1435 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 PPIP5K1Q6PFW1 1433 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 MIA2Q96PC5 1412 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 SCAPERQ9BY12 1400 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 ANKRD30BQ9BXX2 1392 aa0.59□□□□□ -2.32
CEP290-208ENST00000604024 IGLV4-69A0A075B6H9 119 aa0.58□□□□□ -2.32
CEP290-208ENST00000604024 TRABD2BA6NFA1 517 aa0.58□□□□□ -2.32
CEP290-208ENST00000604024 G3V3Y1 287 aa0.58□□□□□ -2.32
CEP290-208ENST00000604024 TYROBPO43914 113 aa0.58□□□□□ -2.32
CEP290-208ENST00000604024 SLC2A10O95528 541 aa0.58□□□□□ -2.32
CEP290-208ENST00000604024 SBK2P0C263 348 aa0.58□□□□□ -2.32
CEP290-208ENST00000604024 OR52Z1P0C646 297 aa0.58□□□□□ -2.32
CEP290-208ENST00000604024 PVRP15151 417 aa0.58□□□□□ -2.32
CEP290-208ENST00000604024 CALML3P27482 149 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms