RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 LRRN3E7EW58 273 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 TPST2O60704 377 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 IFNA1P01562 189 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 KIAA1024LP59773 190 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 CDK3Q00526 305 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 OGDHQ02218 1023 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 KCTD19Q17RG1 926 aaPredicted RBP11.39□□□□□ -0.59
NEK9-210ENST00000557026 ESX1Q8N693 406 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 TMBIM1Q969X1 311 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 LRRN3Q9H3W5 708 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 GIN1Q9NXP7 522 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 PTTG2Q9NZH5 202 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 PRELID3BQ9Y3B1 194 aa11.39□□□□□ -0.59
NEK9-210ENST00000557026 GPR171O14626 319 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 MSL3P1P0C860 447 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 SEMG2Q02383 582 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 CAMK2DQ13557 499 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 BLMHQ13867 455 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 C4orf46Q504U0 113 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 XKRXQ6PP77 449 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 LAS2Q8IYD9 372 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 TRUB1Q8WWH5 349 aaKnown RBP11.38□□□□□ -0.59
NEK9-210ENST00000557026 UTP23Q9BRU9 249 aaKnown RBP11.38□□□□□ -0.59
NEK9-210ENST00000557026 PINK1Q9BXM7 581 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 BRD7Q9NPI1 651 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
NEK9-210ENST00000557026 A0A075B6Q4 140 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 LOC100130705A0A1B0GUX0 176 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 MYADML2A6NDP7 307 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 GRXCR1A8MXD5 290 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 NDUFB2O95178 105 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 GNMTQ14749 295 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 CNN3Q15417 329 aaKnown RBP11.38□□□□□ -0.59
NEK9-210ENST00000557026 MINDY1Q8N5J2 469 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 TAS2R10Q9NYW0 307 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 MALT1Q9UDY8 824 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 PLAGL1Q9UM63 463 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 HCFC2Q9Y5Z7 792 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 SIGLEC1Q9BZZ2 1709 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 PRSS38A1L453 326 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 ANKRD30BLA7E2S9 258 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 IFNGR1P15260 489 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 NCK1P16333 377 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 TCN2P20062 427 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 POLR2HP52434 150 aaKnown RBP11.38□□□□□ -0.59
NEK9-210ENST00000557026 HSD17B12Q53GQ0 312 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 ADAMTSL4Q6UY14 1074 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 ZNF619Q8N2I2 560 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 ZNF321PQ8N8H1 164 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 TMEM68Q96MH6 324 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 CWH43Q9H720 699 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 PLSCR5A0PG75 271 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 KLRC4-KLRK1H3BQV0 150 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 MT-CO2P00403 227 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 C8orf89P0DMQ9 161 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 CD36P16671 472 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 UFM1P61960 85 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 RAB31Q13636 194 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 CLEC12AQ5QGZ9 265 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 APCDD1Q8J025 514 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 ANKK1Q8NFD2 765 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 STOML3Q8TAV4 291 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 PDLIM5Q96HC4 596 aaKnown RBP11.38□□□□□ -0.59
NEK9-210ENST00000557026 SPIN2AQ99865 258 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 SPIN2BQ9BPZ2 258 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 ALOXE3Q9BYJ1 711 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 ZBP1Q9H171 429 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 SPHK1Q9NYA1 384 aa11.38□□□□□ -0.59
NEK9-210ENST00000557026 MRPS2Q9Y399 296 aaKnown RBP11.38□□□□□ -0.59
NEK9-210ENST00000557026 S100A6P06703 90 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 OR12D1P0DN82 309 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 SLC2A2P11168 524 aaPredicted RBP11.37□□□□□ -0.59
NEK9-210ENST00000557026 POU3F2P20265 443 aaPredicted RBP11.37□□□□□ -0.59
NEK9-210ENST00000557026 GJA4P35212 333 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 GINS1Q14691 196 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 ANKDD1AQ495B1 522 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 RANBP10Q6VN20 620 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 BIRC7Q96CA5 298 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 FOXRED1Q96CU9 486 aaPredicted RBP11.37□□□□□ -0.59
NEK9-210ENST00000557026 ECHDC3Q96DC8 303 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 MYADMQ96S97 322 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 SLC7A7Q9UM01 511 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 H7C417 338 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 TLX2O43763 284 aaPredicted RBP11.37□□□□□ -0.59
NEK9-210ENST00000557026 MSX1P28360 303 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 KDELR2P33947 212 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 EIF1P41567 113 aaKnown RBP11.37□□□□□ -0.59
NEK9-210ENST00000557026 CCR5P51681 352 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 CDH15P55291 814 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 VEZF1Q14119 521 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 ATP6AP1Q15904 470 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 CES4AQ5XG92 561 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 TRIM74Q86UV6 250 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 SCGB1C1Q8TD33 95 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 PEBP4Q96S96 227 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 ARNT2Q9HBZ2 717 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 HS3ST2Q9Y278 367 aa11.37□□□□□ -0.59
NEK9-210ENST00000557026 KCTD3Q9Y597 815 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms