RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MAGEA6P43360 314 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 SPATS1Q496A3 300 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 CDKL4Q5MAI5 379 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 ZNF440Q8IYI8 595 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 SGTBQ96EQ0 304 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 GINS1Q14691 196 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 ERMP1Q7Z2K6 904 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 SLC44A3Q8N4M1 653 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 JAGN1Q8N5M9 183 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 MND1Q9BWT6 205 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 ACPTQ9BZG2 426 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 TWSG1Q9GZX9 223 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 GPN2Q9H9Y4 310 aaPredicted RBP16.44■□□□□ 0.22
PTPN21-208ENST00000556564 NENFQ9UMX5 172 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 AP1M2Q9Y6Q5 423 aa16.44■□□□□ 0.22
PTPN21-208ENST00000556564 GRPRP30550 384 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 RGS21Q2M5E4 152 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 RADILQ96JH8 1075 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 SRA1Q9HD15 236 aaKnown RBP16.43■□□□□ 0.22
PTPN21-208ENST00000556564 MUTYHQ9UIF7 546 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 A0A1B0GVI7 797 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 BMP1P13497 986 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 MRPL49Q13405 166 aaKnown RBP16.43■□□□□ 0.22
PTPN21-208ENST00000556564 FAM109BQ6ICB4 259 aaPredicted RBP16.43■□□□□ 0.22
PTPN21-208ENST00000556564 VRK3Q8IV63 474 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 GPR137CQ8N3F9 429 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 OR4C15Q8NGM1 316 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 TNFRSF1BP20333 461 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 IL12AP29459 219 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 RHDQ02161 417 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 ARRDC1-AS1Q9H2J1 176 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 TOR3AQ9H497 397 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 C17orf113A0A1B0GUU1 675 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 FAAHO00519 579 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 CSTBP04080 98 aaKnown RBP16.43■□□□□ 0.22
PTPN21-208ENST00000556564 TSPAN5P62079 268 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 TAF1LQ8IZX4 1826 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 CHCHD4Q8N4Q1 142 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 MFSD9Q8NBP5 474 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 ZUFSPQ96AP4 578 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 A0A0G2JPF8 293 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 HNRNPCL3B7ZW38 293 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 SIGLEC6O43699 453 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 HNRNPCL4P0DMR1 293 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 GDF1P27539 372 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 GSTM2P28161 218 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 ALG10BQ5I7T1 473 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 EEF1A1P5Q5VTE0 462 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 TMPPEQ6ZT21 453 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 UTS2BQ765I0 119 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 OR52N2Q8NGI0 321 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 CDS1Q92903 461 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 CRELD1Q96HD1 420 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 MTHFD2LQ9H903 347 aaPredicted RBP16.43■□□□□ 0.22
PTPN21-208ENST00000556564 SESN1Q9Y6P5 492 aa16.43■□□□□ 0.22
PTPN21-208ENST00000556564 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.42■□□□□ 0.22
PTPN21-208ENST00000556564 ALDH3A2P51648 485 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 GTDC1Q4AE62 458 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 MARCH9Q86YJ5 346 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 CNTN4Q8IWV2 1026 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 NAGSQ8N159 534 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 DHRS1Q96LJ7 313 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 COMMD3Q9UBI1 195 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 HEMK1Q9Y5R4 338 aaPredicted RBP16.42■□□□□ 0.22
PTPN21-208ENST00000556564 PDE4DIPQ5VU43 2346 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 SOX30O94993 753 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 RAB25P57735 213 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 ZNF619Q8N2I2 560 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 SFXN2Q96NB2 322 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 OR5B2Q96R09 309 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 ARHGEF15O94989 841 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 RPS17P08708 135 aaKnown RBP16.42■□□□□ 0.22
PTPN21-208ENST00000556564 AZGP1P25311 298 aaKnown RBP16.42■□□□□ 0.22
PTPN21-208ENST00000556564 INHBCP55103 352 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 ENPP6Q6UWR7 440 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 ADIPOR2Q86V24 386 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 LILRA3Q8N6C8 439 aaPredicted RBP16.42■□□□□ 0.22
PTPN21-208ENST00000556564 WBP11Q9Y2W2 641 aaKnown RBP16.42■□□□□ 0.22
PTPN21-208ENST00000556564 TCRBV5S1A1TA0A578 114 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 PPP6CO00743 305 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 SNNO75324 88 aaPredicted RBP16.42■□□□□ 0.22
PTPN21-208ENST00000556564 PPM1BO75688 479 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 FRMD1Q8N878 549 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 OR2L3Q8NG85 312 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 IFI44Q8TCB0 444 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 OMA1Q96E52 524 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 FBXL20Q96IG2 436 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 FAM46AQ96IP4 442 aaKnown RBP16.42■□□□□ 0.22
PTPN21-208ENST00000556564 TRIM36Q9NQ86 728 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 KDELR2P33947 212 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 MEP1AQ16819 746 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 KCTD11Q693B1 232 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 ZNF611Q8N823 705 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 OR51G2Q8NGK0 314 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 SLC30A3Q99726 388 aa16.42■□□□□ 0.22
PTPN21-208ENST00000556564 TFECO14948 347 aaPredicted RBP16.41■□□□□ 0.22
PTPN21-208ENST00000556564 HTR1EP28566 365 aa16.41■□□□□ 0.22
PTPN21-208ENST00000556564 NAA10P41227 235 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms