RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 UCHL1P09936 223 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SOX9P48436 509 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 CRISP1P54107 249 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 GABARAPL2P60520 117 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 LRIT3Q3SXY7 679 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 DESI1Q6ICB0 168 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 TMEM205Q6UW68 189 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF852Q6ZMS4 543 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 IGFN1Q86VF2 1251 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 MRPL41Q8IXM3 137 aaKnown RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 GATSQ8NAP1 163 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 GLIS1Q8NBF1 620 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 PTERQ96BW5 349 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 MMABQ96EY8 250 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SOX17Q9H6I2 414 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 LIPT1Q9Y234 373 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 DNMT3AQ9Y6K1 912 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 IGKV6D-41A0A0C4DH26 115 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SLC22A31A6NKX4 558 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 H7BY64 318 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 ARVCFO00192 962 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 TP53I11O14683 189 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 TXNDC12O95881 172 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 MPC1LP0DKB6 136 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 CD9P21926 228 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 PRKXP51817 358 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 RIDAP52758 137 aaKnown RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 DIO3P55073 304 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 CAV3P56539 151 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF616Q08AN1 781 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SNTB2Q13425 540 aaKnown RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 GRAMD2AQ8IUY3 354 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 KRTCAP2Q8N6L1 136 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 ABHD5Q8WTS1 349 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 CHPT1Q8WUD6 406 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SHDQ96IW2 340 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 PRAP1Q96NZ9 151 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 OR4K3Q96R72 315 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 GAREM1Q9H706 876 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 ASF1BQ9NVP2 202 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 WNT6Q9Y6F9 365 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 ADAM10O14672 748 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 EEDO75530 441 aaKnown RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CNTN5O94779 1100 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 C1GALT1C1LP0DN25 315 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 RHCEP18577 417 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 OPRL1P41146 370 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 MLC1Q15049 377 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 KCNJ8Q15842 424 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 NTRK2Q16620 822 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CES4AQ5XG92 561 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 TLDC1Q6P9B6 456 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 DTX3Q8N9I9 347 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 HOXB13Q92826 284 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 SIGLEC10Q96LC7 697 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 FBXL18Q96ME1 805 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 MGLLQ99685 303 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 MAGIXQ9H6Y5 334 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 SOCS2O14508 198 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 GALTP07902 379 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 TIA1P31483 386 aaKnown RBP eCLIP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ACVR1BP36896 505 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 KCNC1P48547 511 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 GK2Q14410 553 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 SPHARQ15513 63 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CARD17Q5XLA6 110 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 TMPPEQ6ZT21 453 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ASPGQ86U10 573 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 KLBQ86Z14 1044 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 OR8J1Q8NGP2 316 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 OR6Q1Q8NGQ2 317 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 SLC29A1Q99808 456 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 SULT4A1Q9BR01 284 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 B4GALT6Q9UBX8 382 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 FAM221BA6H8Z2 402 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 SOCS5O75159 536 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 HOXD11P31277 338 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CAMLGP49069 296 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 VSX2P58304 361 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 FPGSQ05932 587 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 PTPRCAPQ14761 206 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 FAM182AQ5T1J6 154 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 GPR157Q5UAW9 335 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 KANK2Q63ZY3 851 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CNKSR3Q6P9H4 555 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ZDHHC12Q96GR4 267 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 SAMD11Q96NU1 681 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CNN2Q99439 309 aaKnown RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 CD300AQ9UGN4 299 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF175Q9Y473 711 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 BACE2Q9Y5Z0 518 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 MYOM1P52179 1685 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 LOC102724200A0A096LPH7 203 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 A8MVJ9 347 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 UPK1BO75841 260 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 HRH2P25021 359 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 GCGRP47871 477 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ARRB1P49407 418 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-208ENST00000538570 HLCSP50747 726 aa9.5□□□□□ -0.89
COL4A6-208ENST00000538570 ART1P52961 327 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms