RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 NUP54Q7Z3B4 507 aa11.38□□□□□ -0.59
DDX41-215ENST00000512431 PRR22Q8IZ63 422 aa11.38□□□□□ -0.59
DDX41-215ENST00000512431 NAT8LQ8N9F0 302 aa11.38□□□□□ -0.59
DDX41-215ENST00000512431 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
DDX41-215ENST00000512431 RGMAQ96B86 450 aa11.38□□□□□ -0.59
DDX41-215ENST00000512431 ZBED6CLQ96FA7 236 aaPredicted RBP11.38□□□□□ -0.59
DDX41-215ENST00000512431 ZNF845Q96IR2 970 aaPredicted RBP11.38□□□□□ -0.59
DDX41-215ENST00000512431 KLHL4Q9C0H6 718 aa11.38□□□□□ -0.59
DDX41-215ENST00000512431 OR2B2Q9GZK3 357 aa11.38□□□□□ -0.59
DDX41-215ENST00000512431 KLRF1Q9NZS2 232 aa11.38□□□□□ -0.59
DDX41-215ENST00000512431 LAMP3Q9UQV4 416 aa11.38□□□□□ -0.59
DDX41-215ENST00000512431 UQCRHLA0A096LP55 91 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.37□□□□□ -0.59
DDX41-215ENST00000512431 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 SLC22A20A6NK97 555 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 HS3ST1O14792 307 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 ABCB7O75027 752 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 ICOSLGO75144 302 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 STK16O75716 305 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 CLPSP04118 112 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 ABCB1P08183 1280 aaPredicted RBP11.37□□□□□ -0.59
DDX41-215ENST00000512431 SLC35E2BP0CK96 405 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 SLC35E2P0CK97 266 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 PPP3CBP16298 524 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 TBXA2RP21731 343 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 LOXP28300 417 aaPredicted RBP11.37□□□□□ -0.59
DDX41-215ENST00000512431 GGT5P36269 586 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 HSPA7P48741 367 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 LHX2P50458 406 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 GFRA1P56159 465 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 SIRPAP78324 504 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 CHIT1Q13231 466 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 TGFBIQ15582 683 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 DEPDC1Q5TB30 811 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 KHDRBS2Q5VWX1 349 aaKnown RBP11.37□□□□□ -0.59
DDX41-215ENST00000512431 ANKRD34AQ69YU3 496 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 MED27Q6P2C8 311 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 TMEM81Q6P7N7 255 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 PPIL6Q8IXY8 311 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 C17orf47Q8NEP4 570 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 ADIPOR1Q96A54 375 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 MAGOHBQ96A72 148 aaKnown RBP11.37□□□□□ -0.59
DDX41-215ENST00000512431 CTHRC1Q96CG8 243 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 SFXN2Q96NB2 322 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 G6PC3Q9BUM1 346 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 OR10A5Q9H207 317 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 SLC17A6Q9P2U8 582 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 CDC42EP3Q9UKI2 254 aa11.37□□□□□ -0.59
DDX41-215ENST00000512431 HCRTR2O43614 444 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 CCNT2O60583 730 aaKnown RBP11.36□□□□□ -0.59
DDX41-215ENST00000512431 PRAMEF4O60810 478 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 PRKRAO75569 313 aaKnown RBP11.36□□□□□ -0.59
DDX41-215ENST00000512431 PPM1BO75688 479 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 CD8BP10966 210 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 EPB42P16452 691 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 ZNF708P17019 499 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 CD22P20273 847 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 CCKARP32238 428 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 GMPRP36959 345 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 CASP2P42575 452 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 SLC12A2P55011 1212 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 EEFSECP57772 596 aaKnown RBP11.36□□□□□ -0.59
DDX41-215ENST00000512431 TBCCQ15814 346 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 BCL2A1Q16548 175 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 PRAMEF9Q5VWM5 478 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 SULT1C3Q6IMI6 304 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 GALNT12Q8IXK2 581 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 ZCCHC7Q8N3Z6 543 aaKnown RBP11.36□□□□□ -0.59
DDX41-215ENST00000512431 ZNF610Q8N9Z0 462 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 GTPBP3Q969Y2 492 aaKnown RBP11.36□□□□□ -0.59
DDX41-215ENST00000512431 ESAMQ96AP7 390 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 TMEM79Q9BSE2 394 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 SORBS1Q9BX66 1292 aaKnown RBP11.36□□□□□ -0.59
DDX41-215ENST00000512431 OR51B5Q9H339 312 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 CXorf21Q9HAI6 301 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 GALNT9Q9HCQ5 603 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 FANCFQ9NPI8 374 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 LYARQ9NX58 379 aaKnown RBP11.36□□□□□ -0.59
DDX41-215ENST00000512431 PROCRQ9UNN8 238 aa11.36□□□□□ -0.59
DDX41-215ENST00000512431 FRG2CA6NGY1 282 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 GLOD5A6NK44 160 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 TAPBPO15533 448 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 EMC8O43402 210 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 S100BP04271 92 aaPredicted RBP11.35□□□□□ -0.59
DDX41-215ENST00000512431 NR2F6P10588 404 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 PIK3R1P27986 724 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 SRD5A2P31213 254 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 KIR2DL2P43627 348 aaPredicted RBP11.35□□□□□ -0.59
DDX41-215ENST00000512431 HNRNPH2P55795 449 aaKnown RBP11.35□□□□□ -0.59
DDX41-215ENST00000512431 CLDN18P56856 261 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 DDX39BQ13838 428 aaKnown RBP11.35□□□□□ -0.59
DDX41-215ENST00000512431 ZNF460Q14592 562 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 EXOC3L2Q2M3D2 409 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 KRTAP24-1Q3LI83 254 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 FBXO48Q5FWF7 155 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 CDKL4Q5MAI5 379 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 TTC27Q6P3X3 843 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 CYP20A1Q6UW02 462 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 GPSM1Q86YR5 675 aa11.35□□□□□ -0.59
DDX41-215ENST00000512431 PLCZ1Q86YW0 608 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms