RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 RYDENQ9NUL5 291 aaKnown RBP16.28■□□□□ 0.2
LSM5-204ENST00000409909 SIRT5Q9NXA8 310 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 NPFFR2Q9Y5X5 522 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 ZNF780BQ9Y6R6 833 aa16.28■□□□□ 0.2
LSM5-204ENST00000409909 CACNA1CQ13936 2221 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 A0A1B0GVC2 190 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 ATP6AP2A0A1C7CYW4 349 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 LRRC3CA6NJW4 275 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 ATP6AP2O75787 350 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 NUDT17P0C025 328 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 NAA20P61599 178 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 KCNJ2P63252 427 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 MRPS35P82673 323 aaKnown RBP16.27■□□□□ 0.2
LSM5-204ENST00000409909 PRSS53Q2L4Q9 553 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 ZNF630Q2M218 657 aaPredicted RBP16.27■□□□□ 0.2
LSM5-204ENST00000409909 CFAP157Q5JU67 520 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 SPDYAQ5MJ70 313 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 BICRALQ6AI39 1079 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 PAOXQ6QHF9 649 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 TRIM46Q7Z4K8 759 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 CCDC116Q8IYX3 515 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 PRR22Q8IZ63 422 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 LRRC25Q8N386 305 aaPredicted RBP16.27■□□□□ 0.2
LSM5-204ENST00000409909 C17orf47Q8NEP4 570 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 ANKRA2Q9H9E1 313 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 ZFP64Q9NPA5 681 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 BCAP29Q9UHQ4 241 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 PLLPQ9Y342 182 aa16.27■□□□□ 0.2
LSM5-204ENST00000409909 PKDREJQ9NTG1 2253 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 EXPH5Q8NEV8 1989 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 NPIPA2E9PIF3 369 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 NPIPA3F8WFD2 350 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 ANXA4P09525 319 aaPredicted RBP16.26■□□□□ 0.19
LSM5-204ENST00000409909 PCSK2P16519 638 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 ABCD3P28288 659 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 EMDP50402 254 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 SLC10A1Q14973 349 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 PCLAFQ15004 111 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 RPS6KA2Q15349 733 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 NNATQ16517 81 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 GXYLT1Q4G148 440 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 LIPMQ5VYY2 423 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 TRABD2AQ86V40 505 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 RPRMLQ8N4K4 120 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 BANPQ8N9N5 519 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 OR52R1Q8NGF1 315 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.26■□□□□ 0.197e-7■■■□□ 16.2
LSM5-204ENST00000409909 DIO2Q92813 273 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 EXOSC8Q96B26 276 aaKnown RBP16.26■□□□□ 0.19
LSM5-204ENST00000409909 ITPAQ9BY32 194 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 ZNF703Q9H7S9 590 aaPredicted RBP16.26■□□□□ 0.19
LSM5-204ENST00000409909 PNPLA3Q9NST1 481 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 TNFRSF10DQ9UBN6 386 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 CCL27Q9Y4X3 112 aa16.26■□□□□ 0.19
LSM5-204ENST00000409909 FREM3P0C091 2139 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 ANKRD33BA6NCL7 494 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 CAPN14A8MX76 684 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 H3BQF6 201 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 TP53I11O14683 189 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 SUSD5O60279 629 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 TRIM3O75382 744 aaPredicted RBP16.25■□□□□ 0.19
LSM5-204ENST00000409909 PRF1P14222 555 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 NRG3P56975 720 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 HEPACAMQ14CZ8 416 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 ZNF628Q5EBL2 1059 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 CLEC6AQ6EIG7 209 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 DESI1Q6ICB0 168 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 OR5M9Q8NGP3 310 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 SPPL2AQ8TCT8 520 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 ZNF675Q8TD23 568 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 KAT2AQ92830 837 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 MARVELD3Q96A59 401 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 SMC6Q96SB8 1091 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 DOHHQ9BU89 302 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 GATA5Q9BWX5 397 aaPredicted RBP16.25■□□□□ 0.19
LSM5-204ENST00000409909 TP63Q9H3D4 680 aaPredicted RBP16.25■□□□□ 0.19
LSM5-204ENST00000409909 SLC35C2Q9NQQ7 365 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 MKS1Q9NXB0 559 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.25■□□□□ 0.19
LSM5-204ENST00000409909 LGALS13Q9UHV8 139 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 BOKQ9UMX3 212 aaPredicted RBP16.25■□□□□ 0.19
LSM5-204ENST00000409909 PTGDR2Q9Y5Y4 395 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 V9GYY5 206 aaPredicted RBP16.25■□□□□ 0.19
LSM5-204ENST00000409909 CSMD1Q96PZ7 3565 aa16.25■□□□□ 0.19
LSM5-204ENST00000409909 OR14I1A6ND48 311 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 C19orf84I3L1E1 186 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 AQP7O14520 342 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 HNRNPRO43390 633 aaKnown RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 ZNF500O60304 480 aaPredicted RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 NME6O75414 186 aaPredicted RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 CRCPO75575 148 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 CLDN14O95500 239 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 ABCB1P08183 1280 aaPredicted RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 UROSP10746 265 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 ENDOUP21128 410 aaKnown RBP16.24■□□□□ 0.19
LSM5-204ENST00000409909 C2orf80Q0P641 193 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 CEBPEQ15744 281 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 IMPG1Q17R60 797 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 FAM71E1Q6IPT2 247 aa16.24■□□□□ 0.19
LSM5-204ENST00000409909 WDR93Q6P2C0 686 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms