RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 HORMAD2Q8N7B1 307 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 CAMKVQ8NCB2 501 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 SLC38A5Q8WUX1 472 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 APOBEC4Q8WW27 367 aaKnown RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 CYGBQ8WWM9 190 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 C10orf90Q96M02 699 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 SERINC2Q96SA4 455 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 EPYCQ99645 322 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 YTHDF1Q9BYJ9 559 aaKnown RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 CHRNA10Q9GZZ6 450 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 SERHL2Q9H4I8 314 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 CLK4Q9HAZ1 481 aaKnown RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 IRAK4Q9NWZ3 460 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 NDUFAF4Q9P032 175 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 KCMF1Q9P0J7 381 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 C3orf18Q9UK00 162 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 ADAMTS20P59510 1910 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 LOC105369274A0A096LPK9 316 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 LOC102723532A0A0G2JNH3 316 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 TMEM150CB9EJG8 249 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 TMX2-CTNND1H3BSU7 103 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 PGRMC2O15173 223 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 ZSCAN9O15535 394 aaPredicted RBP14.18□□□□□ -0.14
SCAF11-204ENST00000395454 E2F6O75461 281 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 CLPTM1O96005 669 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 ZNF888P0CJ79 500 aaPredicted RBP14.18□□□□□ -0.14
SCAF11-204ENST00000395454 AQP1P29972 269 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 TNFRSF17Q02223 184 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 GPR19Q15760 415 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 IFI44LQ53G44 452 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 TTC23Q5W5X9 447 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 ARMC8Q8IUR7 673 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 MCATQ8IVS2 390 aaKnown RBP14.18□□□□□ -0.14
SCAF11-204ENST00000395454 OR4N4Q8N0Y3 316 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 DNAJC22Q8N4W6 341 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 ADAMTS14Q8WXS8 1223 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 LZICQ8WZA0 190 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 TOR3AQ9H497 397 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 SMURF2Q9HAU4 748 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 SEMA3GQ9NS98 782 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 FGF21Q9NSA1 209 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 OCIAD1Q9NX40 245 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 PHF11Q9UIL8 331 aa14.18□□□□□ -0.14
SCAF11-204ENST00000395454 CCDC88CQ9P219 2028 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 SMIM31A0A1B0GVY4 71 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 EFCAB7A8K855 629 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 E9PQ18 207 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 hCG_2039718K7EN88 272 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 M0QX08 132 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 SLC16A6O15403 523 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 PRKRAO75569 313 aaKnown RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 NR2F6P10588 404 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 ITGAMP11215 1152 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 VSX2P58304 361 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 BTN3A2P78410 334 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 TARDBPQ13148 414 aaKnown RBP eCLIP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 RNF220Q5VTB9 566 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 C18orf63Q68DL7 685 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 KDM4DQ6B0I6 523 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 FAHD1Q6P587 224 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 TMPRSS12Q86WS5 348 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 ADAMTS16Q8TE57 1224 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 GEMIN6Q8WXD5 167 aaKnown RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 TPD52L3Q96J77 140 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 OR6C1Q96RD1 312 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 ZNF347Q96SE7 839 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 MAPKAP1Q9BPZ7 522 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 AMBRA1Q9C0C7 1298 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 FANCEQ9HB96 536 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 FAM118AQ9NWS6 357 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 TUBA8Q9NY65 449 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 NDUFA13Q9P0J0 144 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 NTMQ9P121 344 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 BAG5Q9UL15 447 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 PLCL2Q9UPR0 1127 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 PRAMEF25A6NGN4 478 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 H0YGG7 62 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 RECKO95980 971 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 CTSBP07858 339 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 CSNK2A2P19784 350 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 NCBP2P52298 156 aaKnown RBP eCLIP14.17□□□□□ -0.141e-18■■■■□ 24.6
SCAF11-204ENST00000395454 CASP9P55211 416 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 ARF3P61204 181 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 SNRPNP63162 240 aaKnown RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 ACY1Q03154 408 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 IL18R1Q13478 541 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 COL9A2Q14055 689 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 BHLHB9Q6PI77 547 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 ABHD13Q7L211 337 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 RAB11FIP2Q7L804 512 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 SAMD14Q8IZD0 417 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-204ENST00000395454 ARHGEF39Q8N4T4 335 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 TSPAN14Q8NG11 270 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 BBS4Q96RK4 519 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 REEP1Q9H902 201 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 LYRM4Q9HD34 91 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 STARD5Q9NSY2 213 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 MS4A12Q9NXJ0 267 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 ENTPD4Q9Y227 616 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 LOXL2Q9Y4K0 774 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms