RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 FNDC11Q9BVV2 318 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 PCBD2Q9H0N5 130 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 SLC9A8Q9Y2E8 581 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 KLHL20Q9Y2M5 609 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 SLC27A6Q9Y2P4 619 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 NOX1Q9Y5S8 564 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 IRAK3Q9Y616 596 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 SPIN1Q9Y657 262 aaPredicted RBP8.21□□□□□ -1.09
CLK1-201ENST00000321356 A0A0A6YYD5 115 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 A0A0B4J293 547 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 A0A1W2PQL4 384 aaPredicted RBP8.21□□□□□ -1.1
CLK1-201ENST00000321356 FEZF1A0PJY2 475 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 IRGMA1A4Y4 181 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 FABP12A6NFH5 140 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 B4DXG7 233 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 SLC9A3R1O14745 358 aaPredicted RBP8.21□□□□□ -1.1
CLK1-201ENST00000321356 HOXC11O43248 304 aaPredicted RBP8.21□□□□□ -1.1
CLK1-201ENST00000321356 PRODHO43272 600 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 HLA-DQB1P01920 261 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 ALPPP05187 535 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 GAAP10253 952 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 NR2F1P10589 423 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 ADRB3P13945 408 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 DRD2P14416 443 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 GSTM3P21266 225 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 PPP2R1BP30154 601 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 FGF9P31371 208 aaPredicted RBP8.21□□□□□ -1.1
CLK1-201ENST00000321356 SDC2P34741 201 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 GJA8P48165 433 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 KHKP50053 298 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 SMSP52788 366 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 PRMT2P55345 433 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 ST8SIA6P61647 398 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 RPS25P62851 125 aaKnown RBP8.21□□□□□ -1.1
CLK1-201ENST00000321356 UBE3AQ05086 875 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 FUT5Q11128 374 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 CDK10Q15131 360 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 TAB1Q15750 504 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 TBRG1Q3YBR2 411 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 MINDY4Q4G0A6 757 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 TMEM52BQ4KMG9 183 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 ZNF628Q5EBL2 1059 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 SLC35F1Q5T1Q4 408 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 C9orf64Q5T6V5 341 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 TMEM64Q6YI46 380 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 ZNF730Q6ZMV8 503 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 ERN2Q76MJ5 926 aaKnown RBP8.21□□□□□ -1.1
CLK1-201ENST00000321356 LAPTM4BQ86VI4 370 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 AMZ2Q86W34 360 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 C12orf40Q86WS4 652 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 GATAD2AQ86YP4 633 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 VWA5B2Q8N398 1253 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 OR6T1Q8NGN1 323 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 SLC7A6Q92536 515 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 UCN3Q969E3 161 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 RNF31Q96EP0 1072 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 CAPNS2Q96L46 248 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 SOSTQ9BQB4 213 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 KATNB1Q9BVA0 655 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 SPATA5L1Q9BVQ7 753 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 PLA2G12AQ9BZM1 189 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 C11orf54Q9H0W9 315 aaPredicted RBP8.21□□□□□ -1.1
CLK1-201ENST00000321356 GLIPR2Q9H4G4 154 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 MARCH7Q9H992 704 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 SLC23A2Q9UGH3 650 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 SNX7Q9UNH6 387 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 CARD8Q9Y2G2 431 aa8.21□□□□□ -1.1
CLK1-201ENST00000321356 YARS2Q9Y2Z4 477 aaKnown RBP8.21□□□□□ -1.1
CLK1-201ENST00000321356 CENPXA8MT69 81 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 HIDE1A8MVS5 230 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 CENPBD1B2RD01 187 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 KDM4EB2RXH2 506 aaPredicted RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 H7BY64 318 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 CASC3O15234 703 aaKnown RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 PLA2G10O15496 165 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 LZTS3O60299 673 aaPredicted RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 RPN2P04844 631 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 CHRM4P08173 479 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 TSPAN19P0C672 248 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 LIMS3P0CW19 117 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 LIMS4P0CW20 117 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 NR2F6P10588 404 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 ADH5P11766 374 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 MYL12AP19105 171 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 PSMB5P28074 263 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 GABRA5P31644 462 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 MESP2Q0VG99 397 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 SNAPC1Q16533 368 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.11e-6■■□□□ 12.3
CLK1-201ENST00000321356 HNRNPA1L2Q32P51 320 aaKnown RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 C6orf183Q5T699 404 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 OR2G6Q5TZ20 316 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 PRAMEF8Q5VWM4 474 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 PRAMEF7Q5VXH5 474 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 METRNLQ641Q3 311 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 OR4C11Q6IEV9 310 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 ADAMTSL4Q6UY14 1074 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 SLC36A4Q6YBV0 504 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 RTL10Q7L3V2 364 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms