RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 IGHV1-45A0A0A0MS14 117 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 C17orf105B2RV13 164 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 FBP2O00757 339 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 DYRK3O43781 588 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 COX6A1P12074 109 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 TNNI3P19429 210 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 SOX18P35713 384 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 TRPC1P48995 793 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 CDK9P50750 372 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 PCOLCEQ15113 449 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 TBR1Q16650 682 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 PAGE3Q5JUK9 113 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 PAPD4Q6PIY7 484 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 SLC2A7Q6PXP3 512 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 MRGPREQ86SM8 312 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 RETREG3Q86VR2 466 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 DPP10Q8N608 796 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 POU5F2Q8N7G0 328 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 ADCY4Q8NFM4 1077 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 EXTL1Q92935 676 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 TRIM4Q9C037 500 aa18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 SIRT3Q9NTG7 399 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 PPIEQ9UNP9 301 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-221ENST00000622702 A0A087WV62 115 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 IGHV3-20A0A0C4DH32 117 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 SAGE2PA6NJ88 616 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 A8MUA0 341 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 RFXANKO14593 260 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 PLOD3O60568 738 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 CPSF4O95639 269 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 ITGB2P05107 769 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 CT62P0C5K7 136 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 PTGER1P34995 402 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 EEF1A2Q05639 463 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 GABPB1Q06547 395 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 C6orf163Q5TEZ5 329 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 VWA5B2Q8N398 1253 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 MORN4Q8NDC4 146 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 OR4A15Q8NGL6 344 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 DNAJB8Q8NHS0 232 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 ELP4Q96EB1 424 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 FBXL20Q96IG2 436 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 PANX1Q96RD7 426 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 INPP5KQ9BT40 448 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 ARL8BQ9NVJ2 186 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 ZNF639Q9UID6 485 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 POLHQ9Y253 713 aa18.49■□□□□ 0.55
PDLIM2-221ENST00000622702 CCT8L1PA6NM43 557 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 ZCCHC18P0CG32 403 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 S1PR1P21453 382 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 PTPN6P29350 595 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 GPC1P35052 558 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 MC3RP41968 323 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 MRPS35P82673 323 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 FUT7Q11130 342 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 C6orf10Q5SRN2 563 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 FHL5Q5TD97 284 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 BORAQ6PGQ7 559 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 FAM111BQ6SJ93 734 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 C6orf89Q6UWU4 347 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 TMEM107Q6UX40 140 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 TMEM64Q6YI46 380 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 NDUFAF7Q7L592 441 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 NFAM1Q8NET5 270 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 THAP4Q8WY91 577 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 TTC9Q92623 222 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 KAT2AQ92830 837 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 ART5Q96L15 291 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 IMMP1LQ96LU5 166 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 PHF12Q96QT6 1004 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 TUBB6Q9BUF5 446 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 CXorf36Q9H7Y0 433 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 P4HTMQ9NXG6 502 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 NTMQ9P121 344 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 PTGFRNQ9P2B2 879 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 MAP10Q9P2G4 905 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 TAGLN3Q9UI15 199 aa18.48■□□□□ 0.55
PDLIM2-221ENST00000622702 A0A096LPI6 279 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 ERN1O75460 977 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 SEC24DO94855 1032 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 DDAH2O95865 285 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 IGKV3-11P04433 115 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 ABCB1P08183 1280 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 CDKN2CP42773 168 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 GPR143P51810 404 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 PGDP52209 483 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 ZNF267Q14586 743 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 MMEL1Q495T6 779 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 LRIF1Q5T3J3 769 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 REP15Q6BDI9 236 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 OR2L13Q8N349 312 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 PCYOX1LQ8NBM8 494 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 B3GNT7Q8NFL0 401 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 OR7G2Q8NG99 324 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 SLC2A12Q8TD20 617 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 SENP5Q96HI0 755 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 PAIP1Q9H074 479 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 VPS4AQ9UN37 437 aa18.47■□□□□ 0.55
PDLIM2-221ENST00000622702 ERVH48-1M5A8F1 160 aa18.46■□□□□ 0.55
PDLIM2-221ENST00000622702 HRKO00198 91 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms