RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 IPPKQ9H8X2 491 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 CALHM2Q9HA72 323 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 GRHL1Q9NZI5 618 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 A6NNC1 897 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 TRAPPC6AO75865 159 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 KLHL2O95198 593 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 CLDN9O95484 217 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 C2P06681 752 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 BMP5P22003 454 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 OPRM1P35372 400 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 PLTPP55058 493 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 SORDQ00796 357 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 CRYZQ08257 329 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 GTF2H2Q13888 395 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 CPSF6Q16630 551 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 PFKFB4Q16877 469 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 GTF2H2CQ6P1K8 395 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 TMEM81Q6P7N7 255 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 SEM1Q6ZVN7 128 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 WDR20Q8TBZ3 569 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 FBF1Q8TES7 1133 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 ANP32BQ92688 251 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 TMEM41AQ96HV5 264 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 SH3GL2Q99962 352 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 SLC6A15Q9H2J7 730 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 UBQLN3Q9H347 655 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 KCNF1Q9H3M0 494 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 ZNF358Q9NW07 568 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 CRIM1Q9NZV1 1036 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 PSME2Q9UL46 239 aa16.33■□□□□ 0.2
SHKBP1-227ENST00000602011 TMPRSS11DO60235 418 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 EEDO75530 441 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 ACTL6AO96019 429 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 EPXP11678 715 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 KRT15P19012 456 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 MASP1P48740 699 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 SNTA1Q13424 505 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 CEBPEQ15744 281 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 NUP54Q7Z3B4 507 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 ATP6V1E2Q96A05 226 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 RILPQ96NA2 401 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 ZFP3Q96NJ6 502 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 GPATCH1Q9BRR8 931 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 OR10A5Q9H207 317 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 C15orf41Q9Y2V0 281 aa16.32■□□□□ 0.2
SHKBP1-227ENST00000602011 DNHD1Q96M86 4753 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 EML6Q6ZMW3 1958 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 TUBAL3A6NHL2 446 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 RAD51CO43502 376 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 AIFM1O95831 613 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 RHOXF2BP0C7M4 288 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 PORP16435 677 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 KLK2P20151 261 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 CTSSP25774 331 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 CASP3P42574 277 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 TRPC1P48995 793 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 XKP51811 444 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 RCAN2Q14206 197 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 TIGD3Q6B0B8 471 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 SLC30A6Q6NXT4 461 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 CDC20BQ86Y33 519 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 CENPLQ8N0S6 344 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 ZNF615Q8N8J6 731 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 TNIP2Q8NFZ5 429 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 ZPLD1Q8TCW7 415 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 ADIPOR1Q96A54 375 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 NTMT1Q9BV86 223 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 NMRK1Q9NWW6 199 aa16.31■□□□□ 0.2
SHKBP1-227ENST00000602011 NINQ8N4C6 2090 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 MBD3L4A6NDZ8 208 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 MBD3L3A6NE82 208 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 GOLGA6L10A6NI86 522 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 MBD3L5A6NJ08 208 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 GLOD5A6NK44 160 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 ACSL3O95573 720 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 CLPSP04118 112 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 RBP1P09455 135 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 TYK2P29597 1187 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 DGKQP52824 942 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 FBXW4P57775 412 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 DCAF7P61962 342 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 PSPHP78330 225 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 GUCY2DQ02846 1103 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 MROH9Q5TGP6 573 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 GOLGA7Q7Z5G4 137 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 CCDC25Q86WR0 208 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 RNF175Q8N4F7 328 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 RELL2Q8NC24 303 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 MBD3L2Q8NHZ7 208 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 FBXO25Q8TCJ0 367 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 KCTD4Q8WVF5 259 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 ABTB1Q969K4 478 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 NTNG2Q96CW9 530 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 GNRHR2Q96P88 292 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 RNF11Q9Y3C5 154 aa16.3■□□□□ 0.2
SHKBP1-227ENST00000602011 A0A096LPK6 155 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 PGRMC2O15173 223 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 ACOX3O15254 700 aa16.29■□□□□ 0.2
SHKBP1-227ENST00000602011 PRKRAO75569 313 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms