RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ZCCHC10Q8TBK6 192 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 DHRS1Q96LJ7 313 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FXYD6Q9H0Q3 95 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 LMAN2LQ9H0V9 348 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 MTG2Q9H4K7 406 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 RANBP3Q9H6Z4 567 aaPredicted RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 NANSQ9NR45 359 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 TLR9Q9NR96 1032 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 HCN3Q9P1Z3 774 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 TEX13CA0A0J9YWL9 993 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 GLTPD2A6NH11 291 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 ZNF670-ZNF695F2Z2N8 137 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 HOXC11O43248 304 aaPredicted RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 SLC19A2O60779 497 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 IL1AP01583 271 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 CSNK2A2P19784 350 aaPredicted RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 F8A1P23610 371 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 SSTR2P30874 369 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 WASP42768 502 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 DEFA5Q01523 94 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 CRHR2Q13324 411 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 IHHQ14623 411 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FLYWCH1Q4VC44 716 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 CDKL4Q5MAI5 379 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 IL20RBQ6UXL0 311 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 C10orf111Q8N326 155 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.01□□□□□ -0.81
USB1-212ENST00000566082 MYLIPQ8WY64 445 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 OR8D1Q8WZ84 308 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 ISG20Q96AZ6 181 aaKnown RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 GALNT9Q9HCQ5 603 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 CALML5Q9NZT1 146 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 PCDHGA2Q9Y5H1 932 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 CSNK1G3Q9Y6M4 447 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FEZF1A0PJY2 475 aa10□□□□□ -0.81
USB1-212ENST00000566082 CXCL14O95715 111 aa10□□□□□ -0.81
USB1-212ENST00000566082 C8AP07357 584 aa10□□□□□ -0.81
USB1-212ENST00000566082 PYCR1P32322 319 aa10□□□□□ -0.81
USB1-212ENST00000566082 TGFBR2P37173 567 aa10□□□□□ -0.81
USB1-212ENST00000566082 CLCNKAP51800 687 aa10□□□□□ -0.81
USB1-212ENST00000566082 AP3S2P59780 193 aa10□□□□□ -0.81
USB1-212ENST00000566082 WDR5P61964 334 aaKnown RBP10□□□□□ -0.81
USB1-212ENST00000566082 RPS25P62851 125 aaKnown RBP10□□□□□ -0.81
USB1-212ENST00000566082 KCNJ10P78508 379 aa10□□□□□ -0.81
USB1-212ENST00000566082 RANBP3LQ86VV4 465 aaPredicted RBP10□□□□□ -0.81
USB1-212ENST00000566082 PTOV1Q86YD1 416 aa10□□□□□ -0.81
USB1-212ENST00000566082 SYT14Q8NB59 555 aa10□□□□□ -0.81
USB1-212ENST00000566082 RPLP0P6Q8NHW5 317 aa10□□□□□ -0.81
USB1-212ENST00000566082 ING5Q8WYH8 240 aa10□□□□□ -0.81
USB1-212ENST00000566082 OSTF1Q92882 214 aa10□□□□□ -0.81
USB1-212ENST00000566082 GABARAPL1Q9H0R8 117 aa10□□□□□ -0.81
USB1-212ENST00000566082 PDFQ9HBH1 243 aa10□□□□□ -0.81
USB1-212ENST00000566082 TMEM27Q9HBJ8 222 aa10□□□□□ -0.81
USB1-212ENST00000566082 NPAP1Q9NZP6 1156 aa10□□□□□ -0.81
USB1-212ENST00000566082 UBQLN2Q9UHD9 624 aa10□□□□□ -0.81
USB1-212ENST00000566082 YARS2Q9Y2Z4 477 aaKnown RBP10□□□□□ -0.81
USB1-212ENST00000566082 MYO7AQ13402 2215 aa10□□□□□ -0.81
USB1-212ENST00000566082 CACNA1CQ13936 2221 aa10□□□□□ -0.81
USB1-212ENST00000566082 A0A075B6Q4 140 aa10□□□□□ -0.81
USB1-212ENST00000566082 WASHC1A8K0Z3 465 aa10□□□□□ -0.81
USB1-212ENST00000566082 REM1O75628 298 aa10□□□□□ -0.81
USB1-212ENST00000566082 SRCP12931 536 aa10□□□□□ -0.81
USB1-212ENST00000566082 NT5EP21589 574 aa10□□□□□ -0.81
USB1-212ENST00000566082 MPIP34949 423 aa10□□□□□ -0.81
USB1-212ENST00000566082 OR3A3P47888 321 aa10□□□□□ -0.81
USB1-212ENST00000566082 GIPRP48546 466 aa10□□□□□ -0.81
USB1-212ENST00000566082 TIAL1Q01085 375 aaKnown RBP eCLIP10□□□□□ -0.81
USB1-212ENST00000566082 LRRC32Q14392 662 aa10□□□□□ -0.81
USB1-212ENST00000566082 DUSP7Q16829 419 aa10□□□□□ -0.81
USB1-212ENST00000566082 SFRP4Q6FHJ7 346 aaPredicted RBP10□□□□□ -0.81
USB1-212ENST00000566082 TAS1R1Q7RTX1 841 aa10□□□□□ -0.81
USB1-212ENST00000566082 IL17RDQ8NFM7 739 aa10□□□□□ -0.81
USB1-212ENST00000566082 OR10G6Q8NH81 332 aa10□□□□□ -0.81
USB1-212ENST00000566082 COQ8AQ8NI60 647 aa10□□□□□ -0.81
USB1-212ENST00000566082 GRHL3Q8TE85 626 aa10□□□□□ -0.81
USB1-212ENST00000566082 CLIP3Q96DZ5 547 aa10□□□□□ -0.81
USB1-212ENST00000566082 RETREG1Q9H6L5 497 aa10□□□□□ -0.81
USB1-212ENST00000566082 EIF3FO00303 357 aaPredicted RBP10□□□□□ -0.81
USB1-212ENST00000566082 SMAD9O15198 467 aaKnown RBP10□□□□□ -0.81
USB1-212ENST00000566082 NUPL2O15504 423 aaKnown RBP10□□□□□ -0.81
USB1-212ENST00000566082 OR10H2O60403 315 aa10□□□□□ -0.81
USB1-212ENST00000566082 ACADMP11310 421 aa10□□□□□ -0.81
USB1-212ENST00000566082 IL1RNP18510 177 aa10□□□□□ -0.81
USB1-212ENST00000566082 LHCGRP22888 699 aa10□□□□□ -0.81
USB1-212ENST00000566082 PDHA2P29803 388 aa10□□□□□ -0.81
USB1-212ENST00000566082 CTSCP53634 463 aa10□□□□□ -0.81
USB1-212ENST00000566082 PODNL1Q6PEZ8 512 aa10□□□□□ -0.81
USB1-212ENST00000566082 LIMS2Q7Z4I7 341 aa10□□□□□ -0.81
USB1-212ENST00000566082 OOSP2Q86WS3 158 aa10□□□□□ -0.81
USB1-212ENST00000566082 CBARPQ8N350 705 aaPredicted RBP10□□□□□ -0.81
USB1-212ENST00000566082 FTMTQ8N4E7 242 aa10□□□□□ -0.81
USB1-212ENST00000566082 ACBD7Q8N6N7 88 aa10□□□□□ -0.81
USB1-212ENST00000566082 L3MBTL4Q8NA19 623 aa10□□□□□ -0.81
USB1-212ENST00000566082 OR4F15Q8NGB8 312 aa10□□□□□ -0.81
USB1-212ENST00000566082 KLK6Q92876 244 aa10□□□□□ -0.81
USB1-212ENST00000566082 FKBP7Q9Y680 259 aa10□□□□□ -0.81
USB1-212ENST00000566082 MYO9BQ13459 2157 aa10□□□□□ -0.81
USB1-212ENST00000566082 FAM183AA6NL82 134 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 RFPL3O75679 317 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 HK1P19367 917 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms