RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 OR5H15A6NDH6 313 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 TCP11X1B4DZS4 312 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 SCAMP2O15127 329 aaKnown RBP11.89□□□□□ -0.51
VEGFA-224ENST00000523873 PDPK1O15530 556 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 DIAPH2O60879 1101 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 OR2J2O76002 312 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 HPCAL1P37235 193 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 CD96P40200 585 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 OC90Q02509 493 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-224ENST00000523873 MAP4K2Q12851 820 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 HSPB3Q12988 150 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 MAD2L1Q13257 205 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-224ENST00000523873 PDE7AQ13946 482 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 EBPQ15125 230 aaKnown RBP11.89□□□□□ -0.51
VEGFA-224ENST00000523873 TMEM198Q66K66 360 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 SPINK14Q6IE38 97 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 Q6ZS92 163 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 ZNF551Q7Z340 670 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-224ENST00000523873 PRICKLE2Q7Z3G6 844 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 ZNF615Q8N8J6 731 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 OR7G2Q8NG99 324 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 HAS2Q92819 552 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 CTHRC1Q96CG8 243 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 MAGED4Q96JG8 741 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 SIGLEC12Q96PQ1 595 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 RASL10BQ96S79 203 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 EBF4Q9BQW3 602 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 ASIC5Q9NY37 505 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 MYOTQ9UBF9 498 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 ATP6V1HQ9UI12 483 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 ZNF639Q9UID6 485 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 B8ZZF3 427 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 C9JVG2 144 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 SLCO1B7G3V0H7 640 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 FCHO1O14526 889 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 TBX19O60806 448 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 VPS4BO75351 444 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 SORBS2O94875 1100 aaKnown RBP11.88□□□□□ -0.51
VEGFA-224ENST00000523873 OR6B1O95007 311 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 LAMP1P11279 417 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 NTSP30990 170 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 SOX3P41225 446 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 MC3RP41968 323 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 TNFSF10P50591 281 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 CDK9P50750 372 aaKnown RBP11.88□□□□□ -0.51
VEGFA-224ENST00000523873 CLDN8P56748 225 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 GUCY1A3Q02108 690 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 SRSF11Q05519 484 aaKnown RBP11.88□□□□□ -0.51
VEGFA-224ENST00000523873 ZNF169Q14929 603 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-224ENST00000523873 OR1C1Q15619 314 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 NNATQ16517 81 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 SMU1Q2TAY7 513 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 EPGNQ6UW88 154 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 TMEM107Q6UX40 140 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 TMEM64Q6YI46 380 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 SLC29A4Q7RTT9 530 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 ZNF227Q86WZ6 799 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 HPS6Q86YV9 775 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 LGI4Q8N135 537 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 ARMC10Q8N2F6 343 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 MDS2Q8NDY4 140 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 C16orf52Q8NHV5 167 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 ZNF675Q8TD23 568 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 PNPLA2Q96AD5 504 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 MAELQ96JY0 434 aaKnown RBP11.88□□□□□ -0.51
VEGFA-224ENST00000523873 AMDHD1Q96NU7 426 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 UTP23Q9BRU9 249 aaKnown RBP11.88□□□□□ -0.51
VEGFA-224ENST00000523873 ITPAQ9BY32 194 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 WWTR1Q9GZV5 400 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 RNF32Q9H0A6 362 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 TAS2R7Q9NYW3 318 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 ABI3Q9P2A4 366 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 B3GNT3Q9Y2A9 372 aa11.88□□□□□ -0.51
VEGFA-224ENST00000523873 HEMK1Q9Y5R4 338 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-224ENST00000523873 ZGRF1Q86YA3 2104 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 SVILO95425 2214 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 TLN1Q9Y490 2541 aaKnown RBP11.87□□□□□ -0.51
VEGFA-224ENST00000523873 C2orf92A0A1B0GVN3 265 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 PYCARD-AS1I3L0S3 204 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 DYNC1I1O14576 645 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 ANKRD28O15084 1053 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 SUV39H1O43463 412 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 NADKO95544 446 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-224ENST00000523873 GPX3P22352 226 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 MPIP34949 423 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 IDH3AP50213 366 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 SSR4P51571 173 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 NR0B1P51843 470 aaKnown RBP11.87□□□□□ -0.51
VEGFA-224ENST00000523873 AQP5P55064 265 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 MLLT10P55197 1068 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 UFM1P61960 85 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 SF3A3Q12874 501 aaKnown RBP eCLIP11.87□□□□□ -0.519e-12■■■■■ 32
VEGFA-224ENST00000523873 PGS1Q32NB8 556 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 LSM12Q3MHD2 195 aaKnown RBP11.87□□□□□ -0.51
VEGFA-224ENST00000523873 FHL5Q5TD97 284 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 OGFOD2Q6N063 350 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 RGS9BPQ6ZS82 235 aa11.87□□□□□ -0.51
VEGFA-224ENST00000523873 R3HCC1LQ7Z5L2 792 aaKnown RBP11.87□□□□□ -0.51
VEGFA-224ENST00000523873 RIMKLAQ8IXN7 391 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms