RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 AP4B1Q9Y6B7 739 aa6.81□□□□□ -1.32
MRPS28-205ENST00000519386 SPACA6W5XKT8 324 aa6.81□□□□□ -1.32
MRPS28-205ENST00000519386 SCN3AQ9NY46 2000 aa6.81□□□□□ -1.32
MRPS28-205ENST00000519386 ACACBO00763 2458 aa6.81□□□□□ -1.32
MRPS28-205ENST00000519386 NINQ8N4C6 2090 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 TMEM247A6NEH6 219 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 TLCD2A6NGC4 264 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 POM121CA8CG34 1229 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 A8MVJ9 347 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 C4orf51C9J302 202 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 H0YAE9 185 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 AGRPO00253 132 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 UPK1AO00322 258 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 RTCAO00442 366 aaKnown RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ACOX3O15254 700 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 PROM1O43490 865 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 B3GALT2O43825 422 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SRPX2O60687 465 aaPredicted RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 CTSVO60911 334 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 PRKD3O94806 890 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SOX30O94993 753 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 TNFAIP8O95379 198 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 CPNE6O95741 557 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 AIFM1O95831 613 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 FHP07954 510 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 MSL3P1P0C860 447 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ALOX12P18054 663 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 POLR2CP19387 275 aaPredicted RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 CERS1P27544 350 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 PPP2R1BP30154 601 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 TLX1P31314 330 aaPredicted RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ALDH9A1P49189 494 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 KHKP50053 298 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ALDH3A2P51648 485 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 RPS6KA3P51812 740 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ARSFP54793 590 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 MANFP55145 182 aaKnown RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 GFERP55789 205 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ITGA1P56199 1179 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 DSTNP60981 165 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 PPP1CAP62136 330 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 PRR5P85299 388 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 EEF1A2Q05639 463 aaKnown RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 POU4F2Q12837 409 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 TARDBPQ13148 414 aaKnown RBP eCLIP6.8□□□□□ -1.322e-11■■■■■ 38.1
MRPS28-205ENST00000519386 SLAMF1Q13291 335 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SQSTM1Q13501 440 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SCARB2Q14108 478 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ISXQ2M1V0 245 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 NHSL2Q5HYW2 709 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 GARNL3Q5VVW2 1013 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 REEP3Q6NUK4 255 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 TMEM214Q6NUQ4 689 aaKnown RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ENPP6Q6UWR7 440 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ZNF574Q6ZN55 896 aaPredicted RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 AMIGO2Q86SJ2 522 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 HIPK1Q86Z02 1210 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ZDHHC13Q8IUH4 622 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 PLD3Q8IV08 490 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SLITRK4Q8IW52 837 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 CBR4Q8N4T8 237 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 C19orf47Q8N9M1 422 aaKnown RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ZSCAN1Q8NBB4 408 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 C7orf57Q8NEG2 295 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 OR4D9Q8NGE8 314 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 OR8K5Q8NH50 307 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 FBXO30Q8TB52 745 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 FKBP10Q96AY3 582 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 TCTN2Q96GX1 697 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 ZNF285Q96NJ3 590 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SEPHS2Q99611 448 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SORBS1Q9BX66 1292 aaKnown RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 BTBD2Q9BX70 525 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SEMA6AQ9H2E6 1030 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 CXorf36Q9H7Y0 433 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SLAMF7Q9NQ25 335 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 THSD1Q9NS62 852 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SIRT3Q9NTG7 399 aaPredicted RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 GPATCH2Q9NW75 528 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SMPD3Q9NY59 655 aaPredicted RBP6.8□□□□□ -1.32
MRPS28-205ENST00000519386 NTMQ9P121 344 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 PDP2Q9P2J9 529 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SCOCQ9UIL1 159 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 UTS2RQ9UKP6 389 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 CES1P1Q9UKY3 287 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 DAPP1Q9UN19 280 aa6.8□□□□□ -1.32
MRPS28-205ENST00000519386 SEC16AO15027 2179 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 MN1Q10571 1320 aaPredicted RBP6.79□□□□□ -1.32
MRPS28-205ENST00000519386 IGHV5-10-1A0A0J9YXX1 117 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 A0A1W2PR48 441 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 PMS2P1A4D2B8 440 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 A8MU76 341 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 SOCS2O14508 198 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 EI24O14681 340 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 ADAMDEC1O15204 470 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 SUV39H1O43463 412 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 TPST1O60507 370 aa6.79□□□□□ -1.32
MRPS28-205ENST00000519386 GALR3O60755 368 aaPredicted RBP6.79□□□□□ -1.32
MRPS28-205ENST00000519386 BMP10O95393 424 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms