RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	DIO3	P55073	304 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CLDN15	P56746	228 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	VLDLR	P98155	873 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF844	Q08AG5	666 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CTBP1	Q13363	440 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RBBP5	Q15291	538 aa	Known RBP	7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NTRK2	Q16620	822 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	EXOC3L2	Q2M3D2	409 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LINC00523	Q86TU6	105 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	DENND6A	Q8IWF6	608 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PPM1N	Q8N819	430 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PPHLN1	Q8NEY8	458 aa	Known RBP	7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR10H5	Q8NGA6	315 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR5L2	Q8NGL0	311 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR8K3	Q8NH51	312 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR14A16	Q8NHC5	309 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	EEF1AKMT1	Q8WVE0	214 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	DAZL	Q92904	295 aa	Known RBP	7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MS4A6E	Q96DS6	147 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MRFAP1L1	Q96HT8	127 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GAL3ST4	Q96RP7	486 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TM9SF2	Q99805	663 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MAPKAP1	Q9BPZ7	522 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ANP32E	Q9BTT0	268 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	C12orf65	Q9H3J6	166 aa	Known RBP	7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	EML4	Q9HC35	981 aa	Known RBP	7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TMEM160	Q9NX00	188 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SYBU	Q9NX95	663 aa		7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TEX10	Q9NXF1	929 aa	Predicted RBP	7.77	□□□□□ -1.17
NIF3L1-206	ENST00000416651		A0A0G2JK05	382 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651		A0A1W2PS29	197 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SERINC4	A6NH21	518 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	UBFD1	O14562	309 aa	Known RBP	7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PSMD3	O43242	534 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ERI3	O43414	337 aa	Known RBP	7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	FGF17	O60258	216 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR10H2	O60403	315 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ESR1	P03372	595 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CPN1	P15169	458 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MGAT1	P26572	445 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PTGDS	P41222	190 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CASP3	P42574	277 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LHX2	P50458	406 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CLDN18	P56856	261 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TCEAL1	Q15170	157 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TSC22D1	Q15714	1073 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	C18orf21	Q32NC0	220 aa	Predicted RBP	7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	BEX5	Q5H9J7	111 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PCID2	Q5JVF3	399 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SEZ6L2	Q6UXD5	910 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF793	Q6ZN11	406 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GRAMD2A	Q8IUY3	354 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF595	Q8IYB9	648 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KLHDC8A	Q8IYD2	350 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MPP5	Q8N3R9	675 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR56A3	Q8NH54	315 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GABPB2	Q8TAK5	448 aa	Predicted RBP	7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NUBPL	Q8TB37	319 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SLC35B2	Q8TB61	432 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SPPL2A	Q8TCT8	520 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	UCN3	Q969E3	161 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TRMT61A	Q96FX7	289 aa	Known RBP	7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SOX7	Q9BT81	388 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NTMT1	Q9BV86	223 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GALNT9	Q9HCQ5	603 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SERHL	Q9NQF3	203 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CNIH4	Q9P003	139 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	DHRS7	Q9Y394	339 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	EXPH5	Q8NEV8	1989 aa		7.76	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RYR3	Q15413	4870 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RTCA	O00442	366 aa	Known RBP	7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CLOCK	O15516	846 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SH3BGRL	O75368	114 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LY6H	O94772	140 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NTN1	O95631	604 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RAB6A	P20340	208 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TBXA2R	P21731	343 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	AHR	P35869	848 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MSH2	P43246	934 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MASP1	P48740	699 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TERF1	P54274	439 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MTTP	P55157	894 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GFRA1	P56159	465 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	HERVK_113	P63132	956 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ERVK-8	P63133	956 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	IRX1	P78414	480 aa	Predicted RBP	7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	STX4	Q12846	297 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CYP1B1	Q16678	543 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TIGD3	Q6B0B8	471 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CYB5R2	Q6BCY4	276 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ANGPTL8	Q6UXH0	198 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	UBE3D	Q7Z6J8	389 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	STRA8	Q7Z7C7	330 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TMPRSS11B	Q86T26	416 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF525	Q8N782	197 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KBTBD8	Q8NFY9	601 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SMAP2	Q8WU79	429 aa	Predicted RBP	7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SLC5A11	Q8WWX8	675 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CCT6B	Q92526	530 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LRRC45	Q96CN5	670 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms