RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CPNE5Q9HCH3 593 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 A0A0U1RQS6 177 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR2AT4A6NND4 320 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 KHNYNO15037 678 aaKnown RBP16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 CCR7P32248 378 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 SLC6A9P48067 706 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 RIPPLY1Q0D2K3 151 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 SPARTQ8N0X7 666 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR6N2Q8NGY6 317 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 POLE4Q9NR33 117 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 SLC35F4A4IF30 521 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 SOX1O00570 391 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 PTNP21246 168 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 MLIPQ5VWP3 458 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 ASB11Q8WXH4 323 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 NELL2Q99435 816 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 SLC17A9Q9BYT1 436 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 SLC6A15Q9H2J7 730 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 CLMPQ9H6B4 373 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 PCDHGA8Q9Y5G5 932 aa16.27■□□□□ 0.19
TRAPPC11-201ENST00000334690 PTTG1O95997 202 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 CSN2P05814 226 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 LCKP06239 509 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 PGAM2P15259 253 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 NTSR1P30989 418 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 NEIL2Q969S2 332 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 CASD1Q96PB1 797 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 LINC00597Q9H2U6 94 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 DMRT3Q9NQL9 472 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 C19orf25Q9UFG5 118 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 INTS6Q9UL03 887 aaKnown RBP16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 KNL1Q8NG31 2342 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 PLCH1Q4KWH8 1693 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 ACTA2P62736 377 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 ACTG2P63267 376 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 ARHGAP19Q14CB8 494 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 SCGB2B2Q4G0G5 96 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 LCTLQ6UWM7 567 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 SGTBQ96EQ0 304 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 ZDHHC12Q96GR4 267 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 ABCG5Q9H222 651 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 FBRSQ9HAH7 460 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 NMNAT1Q9HAN9 279 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 ACOT13Q9NPJ3 140 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 FAIMQ9NVQ4 179 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 MYO10Q9HD67 2058 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 TJP1Q07157 1748 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 KLK3P07288 261 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 AOAHP28039 575 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 HOXC13P31276 330 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 PUS10Q3MIT2 529 aaKnown RBP16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 GLT8D1Q68CQ7 371 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 DPPA4Q7L190 304 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 RETREG3Q86VR2 466 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 KLBQ86Z14 1044 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 CMKLR1Q99788 373 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 PTGES2Q9H7Z7 377 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 DDX60Q8IY21 1712 aaKnown RBP16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 FXYD6-FXYD2A0A087WZ82 144 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 CCDC85CA6NKD9 419 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 HCRTR2O43614 444 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 TNFRSF1BP20333 461 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 S1PR1P21453 382 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 VAMP1P23763 118 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 MAGEA2P43356 314 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 SLC7A9P82251 487 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 BAIAP2L2Q6UXY1 529 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 ZNF440Q8IYI8 595 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 TMEM156Q8N614 296 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 OR6N1Q8NGY5 312 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 CLSTN3Q9BQT9 956 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 ACTRT3Q9BYD9 372 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 FXYD6Q9H0Q3 95 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 NUDT15Q9NV35 164 aa16.26■□□□□ 0.19
TRAPPC11-201ENST00000334690 A0A1B0GVI7 797 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 E2F3O00716 465 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 LRRTM2O43300 516 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 GNAO1P09471 354 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 DDCP20711 480 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 CFL1P23528 166 aaKnown RBP16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 SOX2P48431 317 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 AP2S1P53680 142 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 OC90Q02509 493 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 MAD2L1BPQ15013 274 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 HNRNPA1L2Q32P51 320 aaKnown RBP16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 CHERPQ8IWX8 916 aaKnown RBP16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 GATAD2BQ8WXI9 593 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 RBCK1Q9BYM8 510 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 TRAPPC13A5PLN9 417 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 ITGB7P26010 798 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 ZXDBP98169 803 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 DSC1Q08554 894 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 HMGN2P46Q86SG4 172 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 RPLP0P6Q8NHW5 317 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 THAP6Q8TBB0 222 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 MYNNQ9NPC7 610 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 ENPP5Q9UJA9 477 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 GGT2P36268 569 aa16.25■□□□□ 0.19
TRAPPC11-201ENST00000334690 PNCKQ6P2M8 343 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms