RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 DUS1LQ6P1R4 473 aaKnown RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 ASB18Q6ZVZ8 466 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 RASGRP3Q8IV61 690 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 SLITRK4Q8IW52 837 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 MCEMP1Q8IX19 187 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 TNFAIP8L1Q8WVP5 186 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 SERINC2Q96SA4 455 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 ZFYVE21Q9BQ24 234 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 PDFQ9HBH1 243 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 AHSA1O95433 338 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 TRA2BP62995 288 aaKnown RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 VLDLRP98155 873 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 DNASE1L3Q13609 305 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 TOMM5Q8N4H5 51 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 SLC6A16Q9GZN6 736 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 P2RY12Q9H244 342 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 MKL2Q9ULH7 1088 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 GNAO1P09471 354 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF517Q6ZMY9 492 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-201ENST00000264555 RFLNAQ6ZTI6 216 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 METTL27Q8N6F8 245 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-201ENST00000264555 TMEM102Q8N9M5 508 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-201ENST00000264555 PAPD5Q8NDF8 572 aaKnown RBP15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ADAMTS18Q8TE60 1221 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ST14Q9Y5Y6 855 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF726A6NNF4 738 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 DRD1P21728 446 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 GPR143P51810 404 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 OR12D2P58182 307 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 WFDC5Q8TCV5 224 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 CPPED1Q9BRF8 314 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-201ENST00000264555 SORBS1Q9BX66 1292 aaKnown RBP15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ENTPD2Q9Y5L3 495 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ANKDD1AQ495B1 522 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF542PQ5EBM4 170 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 FUNDC1Q8IVP5 155 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 LILRA2Q8N149 483 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 OR9Q2Q8NGE9 314 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 OR51A7Q8NH64 312 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 TIMM29Q9BSF4 260 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 NPIPA5E9PKD4 350 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 VILLO15195 856 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 KIAA0513O60268 411 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 S100A1P23297 94 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 STARP49675 285 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ACTC1P68032 377 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ACTA1P68133 377 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 TRAM1Q15629 374 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ANKRD33Q7Z3H0 272 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 KLRF1Q9NZS2 232 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 NPIPA1Q9UND3 350 aa15.89■□□□□ 0.13
PHRF1-201ENST00000264555 ITGAMP11215 1152 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 MTHFD2P13995 350 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 MAPK3P27361 379 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-201ENST00000264555 CERS1P27544 350 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 HHEXQ03014 270 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 IRF4Q15306 451 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 FAM78AQ5JUQ0 283 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF548Q8NEK5 533 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-201ENST00000264555 OR8J2Q8NGG1 315 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 CCDC115Q96NT0 180 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 ERMAPQ96PL5 475 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-201ENST00000264555 ABI3Q9P2A4 366 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 CDH10Q9Y6N8 788 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 IL1RNP18510 177 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 LRIT3Q3SXY7 679 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 RNF175Q8N4F7 328 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 THEM6Q8WUY1 208 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 DMRTB1Q96MA1 342 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF583Q96ND8 569 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 MS4A4EQ96PG1 132 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 KLHL31Q9H511 634 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 C19orf25Q9UFG5 118 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-201ENST00000264555 A0A075B6Q4 140 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 SH3PXD2BA1X283 911 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 ISPDA4D126 451 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 APOL3O95236 402 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 CR2P20023 1033 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF181Q2M3W8 571 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 PHF19Q5T6S3 580 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 OR52E1Q8NGJ3 308 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 HTR1AP08908 422 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 ENDOUP21128 410 aaKnown RBP15.88■□□□□ 0.13
PHRF1-201ENST00000264555 SLC9A3P48764 834 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 SHC2P98077 582 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 MBTPS1Q14703 1052 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 KIR2DS3Q14952 304 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 BORAQ6PGQ7 559 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 LHFPL3Q86UP9 236 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 NEIL3Q8TAT5 605 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 TGM7Q96PF1 710 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 TM9SF2Q99805 663 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 ZNF559Q9BR84 538 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 IL37Q9NZH6 218 aa15.88■□□□□ 0.13
PHRF1-201ENST00000264555 WASH3PC4AMC7 463 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 H3BMQ9 156 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 TACR1P25103 407 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 IMPA1P29218 277 aa15.87■□□□□ 0.13
PHRF1-201ENST00000264555 RPL6Q02878 288 aaKnown RBP15.87■□□□□ 0.13
PHRF1-201ENST00000264555 FIGNL1Q6PIW4 674 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms