RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ADAM15Q13444 863 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 CDH18Q13634 790 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 DSG2Q14126 1118 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 FAM71E1Q6IPT2 247 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 ANKRD54Q6NXT1 300 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 TEX261Q6UWH6 196 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 USP45Q70EL2 814 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 FBXL6Q8N531 539 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 OR56A3Q8NH54 315 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 FGF11Q92914 225 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 CHFRQ96EP1 664 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 MED8Q96G25 268 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 PRM3Q9NNZ6 103 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 A4GALTQ9NPC4 353 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 TRPM5Q9NZQ8 1165 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 U3KQ87 197 aa16.7■□□□□ 0.26
RAB40C-205ENST00000539661 LOC102723532A0A0G2JNH3 316 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 ISM1B1AKI9 464 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 C5orf58C9J3I9 102 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 MEN1O00255 615 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 SGTAO43765 313 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 PLOD3O60568 738 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 POU3F3P20264 500 aaPredicted RBP16.69■□□□□ 0.26
RAB40C-205ENST00000539661 SOAT1P35610 550 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 EFNB1P98172 346 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 TMEM107Q6UX40 140 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 COMMD6Q7Z4G1 85 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 LINC00471Q8N535 108 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 LRR1Q96L50 414 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 GFM1Q96RP9 751 aaKnown RBP16.69■□□□□ 0.26
RAB40C-205ENST00000539661 RERGLQ9H628 205 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 SLC28A3Q9HAS3 691 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 CDK2AP1O14519 115 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 ZNF197O14709 1029 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 SH3BP5O60239 455 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 SOD1P00441 154 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 ATP12AP54707 1039 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 GPR32P1Q8NGA4 272 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 C16orf78Q8WTQ4 265 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 TM9SF2Q99805 663 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 NLNQ9BYT8 704 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 SEMA3GQ9NS98 782 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 ABT1Q9ULW3 272 aaKnown RBP16.69■□□□□ 0.26
RAB40C-205ENST00000539661 NCKAP1Q9Y2A7 1128 aa16.69■□□□□ 0.26
RAB40C-205ENST00000539661 ASGR1P07306 291 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 TNNI3P19429 210 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 SLC6A1P30531 599 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 SEMG2Q02383 582 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 RGS1Q08116 209 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 NFE2L1Q14494 772 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 SDE2Q6IQ49 451 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 SERPINA13PQ6UXR4 307 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 LRRC17Q8N6Y2 441 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 ARHGAP9Q9BRR9 750 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 EMC7Q9NPA0 242 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 TMEM161AQ9NX61 479 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 MALT1Q9UDY8 824 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 ICKQ9UPZ9 632 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 USP34Q70CQ2 3546 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 EYSQ5T1H1 3165 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 FABP7O15540 132 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 BDKRB1P46663 353 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 TUFMP49411 452 aaKnown RBP16.68■□□□□ 0.26
RAB40C-205ENST00000539661 CAV3P56539 151 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 MADCAM1Q13477 382 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 OR2G6Q5TZ20 316 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 MFSD14CQ5VZR4 134 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 OTOP2Q7RTS6 562 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 ABI3BPQ7Z7G0 1075 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 GRAMD2AQ8IUY3 354 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 ZNF680Q8NEM1 530 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 ZNF431Q8TF32 576 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-205ENST00000539661 GATAD2BQ8WXI9 593 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 UCN3Q969E3 161 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 SPNS1Q9H2V7 528 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 KCNE2Q9Y6J6 123 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 PCM1Q15154 2024 aa16.68■□□□□ 0.26
RAB40C-205ENST00000539661 SMIM30A4D0T7 59 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 PRODHO43272 600 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 CHP2O43745 196 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 SEMA7AO75326 666 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 TPOP07202 933 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 CHRM5P08912 532 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-205ENST00000539661 GIPRP48546 466 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 CDK5Q00535 292 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 MC1RQ01726 317 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 GINS1Q14691 196 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 ZNF57Q68EA5 555 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-205ENST00000539661 SLCO4C1Q6ZQN7 724 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 APCDD1Q8J025 514 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 WFDC5Q8TCV5 224 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 ACOT12Q8WYK0 555 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 ZNF354BQ96LW1 612 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 POLHQ9Y253 713 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 SZT2Q5T011 3432 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 BTN3A3O00478 584 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 NME6O75414 186 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-205ENST00000539661 OR7A10O76100 309 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 CATP04040 527 aaKnown RBP16.67■□□□□ 0.26
RAB40C-205ENST00000539661 KCNA10Q16322 511 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms