RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	PIGG	Q5H8A4	983 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RNFT1	Q5M7Z0	435 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	C1QL3	Q5VWW1	255 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	OPN5	Q6U736	354 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GPALPP1	Q8IXQ4	340 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SLC22A8	Q8TCC7	542 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	C16orf78	Q8WTQ4	265 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TMEM109	Q9BVC6	243 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CENPH	Q9H3R5	247 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SH3BGRL2	Q9UJC5	107 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	UTS2R	Q9UKP6	389 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZNF780B	Q9Y6R6	833 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CROCC	Q5TZA2	2017 aa		13.08	□□□□□ -0.31
CCHCR1-222	ENST00000507459	USP9X	Q93008	2570 aa	Predicted RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	TRGV8	A0A0C4DH27	118 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	C2orf92	A0A1B0GVN3	265 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	SERTM1	A2A2V5	107 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	AZIN1	O14977	448 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	RGS16	O15492	202 aa	Predicted RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CLPS	P04118	112 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ANXA4	P09525	319 aa	Predicted RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	DUSP2	Q05923	314 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	RBPJ	Q06330	500 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	EBP	Q15125	230 aa	Known RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	C4orf17	Q53FE4	359 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	HLA-DQA1	Q5Y7H0	255 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	FAM111B	Q6SJ93	734 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	RTL4	Q6ZR62	310 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ZCCHC23	Q6ZST2	131 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	FJX1	Q86VR8	437 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ADCY4	Q8NFM4	1077 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	EXOSC8	Q96B26	276 aa	Known RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CNRIP1	Q96F85	164 aa	Predicted RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	GPR137	Q96N19	417 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	WWTR1	Q9GZV5	400 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	OR10A5	Q9H207	317 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ASH1L	Q9NR48	2969 aa	Known RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	DEPP	Q9NTK1	212 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	POLR3H	Q9Y535	204 aa	Predicted RBP	13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	PTGDR2	Q9Y5Y4	395 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459	HECTD1	Q9ULT8	2610 aa		13.08	□□□□□ -0.32
CCHCR1-222	ENST00000507459		A1L4Q6	167 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	OR6C76	A6NM76	312 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	TFEC	O14948	347 aa	Predicted RBP	13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ZNHIT1	O43257	154 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ASNA1	O43681	348 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	HS6ST1	O60243	411 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	SEC22B	O75396	215 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	NADK	O95544	446 aa	Predicted RBP	13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	TUBB	P07437	444 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CHRNG	P07510	517 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	STS	P08842	583 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	DRD2	P14416	443 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	NR0B1	P51843	470 aa	Known RBP	13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	HSF1	Q00613	529 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	PLGLB1	Q02325	96 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	FUT7	Q11130	342 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	HEPACAM	Q14CZ8	416 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	PRICKLE4	Q2TBC4	344 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	KRTCAP3	Q53RY4	240 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CEP85L	Q5SZL2	805 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	GALNT18	Q6P9A2	607 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	TMEM64	Q6YI46	380 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	TRIM46	Q7Z4K8	759 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	SIAH3	Q8IW03	269 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CCDC116	Q8IYX3	515 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	LRRC25	Q8N386	305 aa	Predicted RBP	13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	POGLUT1	Q8NBL1	392 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	FAM13C	Q8NE31	585 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	OR5M3	Q8NGP4	307 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	SGCZ	Q96LD1	299 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	PSMG3-AS1	Q96PY0	264 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	TRMO	Q9BU70	441 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	BCAP29	Q9UHQ4	241 aa		13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459	DIDO1	Q9BTC0	2240 aa	Known RBP	13.07	□□□□□ -0.32
CCHCR1-222	ENST00000507459		A0A0G2JMM0	328 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459		A0A1B0GUH1	482 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459		A0A1W2PPB8	328 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459		A0A1W2PRS3	328 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	PINLYP	A6NC86	204 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	KIR3DP1	A8MWS1	328 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	SLC28A1	O00337	649 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CTIF	O43310	598 aa	Known RBP	13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	TYROBP	O43914	113 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	NPHS1	O60500	1241 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CDC40	O60508	579 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	RSL1D1	O76021	490 aa	Known RBP	13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CHEK2	O96017	543 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	LDLR	P01130	860 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459		P04436	131 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ATP1B1	P05026	303 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CCL3	P10147	92 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	CNR1	P21554	472 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ZNF763	Q0D2J5	394 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	C2orf80	Q0P641	193 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	MGAT2	Q10469	447 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	EXOSC7	Q15024	291 aa	Known RBP	13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	LTB4R	Q15722	352 aa		13.06	□□□□□ -0.32
CCHCR1-222	ENST00000507459	ARL13A	Q5H913	290 aa	Predicted RBP	13.06	□□□□□ -0.32

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