RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 SLC5A2P31639 672 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 FEN1P39748 380 aaKnown RBP6.84□□□□□ -1.31
LSM8-204ENST00000424702 PCBP4P57723 403 aaKnown RBP6.84□□□□□ -1.31
LSM8-204ENST00000424702 MRPS35P82673 323 aaKnown RBP6.84□□□□□ -1.31
LSM8-204ENST00000424702 CDK6Q00534 326 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 TNFRSF17Q02223 184 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 PCDH1Q08174 1060 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 SQSTM1Q13501 440 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 DSG2Q14126 1118 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 ZNF630Q2M218 657 aaPredicted RBP6.84□□□□□ -1.31
LSM8-204ENST00000424702 ZXDCQ2QGD7 858 aaPredicted RBP6.84□□□□□ -1.31
LSM8-204ENST00000424702 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.84□□□□□ -1.31
LSM8-204ENST00000424702 FAAH2Q6GMR7 532 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 ERMP1Q7Z2K6 904 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 PATL1Q86TB9 770 aaKnown RBP6.84□□□□□ -1.31
LSM8-204ENST00000424702 RNF130Q86XS8 419 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 METTL27Q8N6F8 245 aaPredicted RBP6.84□□□□□ -1.31
LSM8-204ENST00000424702 FAM47BQ8NA70 645 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 ATG16L2Q8NAA4 619 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 MAGEE2Q8TD90 523 aaPredicted RBP6.84□□□□□ -1.31
LSM8-204ENST00000424702 NUDT8Q8WV74 236 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 SLC41A2Q96JW4 573 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 GAL3ST4Q96RP7 486 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 ORAI3Q9BRQ5 295 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 SLC6A16Q9GZN6 736 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 SLC6A20Q9NP91 592 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 SLC35C2Q9NQQ7 365 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 CD300AQ9UGN4 299 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 MAN2B2Q9Y2E5 1009 aa6.84□□□□□ -1.31
LSM8-204ENST00000424702 LRIT2A6NDA9 550 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 ZNF891A8MT65 544 aaPredicted RBP6.84□□□□□ -1.32
LSM8-204ENST00000424702 NPIPB8E9PQR5 432 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 FXYD1O00168 92 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 CLOCKO15516 846 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 KCNK5O95279 499 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 C9P02748 559 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 FHP07954 510 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 C8orf89P0DMQ9 161 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 ERGP11308 486 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 EEF1B2P24534 225 aaKnown RBP6.84□□□□□ -1.32
LSM8-204ENST00000424702 XKP51811 444 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 HSD17B7P56937 341 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 MC2RQ01718 297 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 RBBP4Q09028 425 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 TCF15Q12870 199 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 EXT1Q16394 746 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 FAM71E1Q6IPT2 247 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 ZNF425Q6IV72 752 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 DLEU7Q6UYE1 221 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 DHRSXQ8N5I4 330 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 TMEM156Q8N614 296 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 ZNF614Q8N883 585 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 COX18Q8N8Q8 333 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 CLEC1AQ8NC01 280 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 CIDECQ96AQ7 238 aaPredicted RBP6.84□□□□□ -1.32
LSM8-204ENST00000424702 B3GNT4Q9C0J1 378 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 EPS8L2Q9H6S3 715 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 KLF15Q9UIH9 416 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 TTC28Q96AY4 2481 aa6.84□□□□□ -1.32
LSM8-204ENST00000424702 ACOT8O14734 319 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 ANKRD28O15084 1053 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 LCMT2O60294 686 aaKnown RBP6.83□□□□□ -1.32
LSM8-204ENST00000424702 FABP3P05413 133 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 C8BP07358 591 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 CD59P13987 128 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 RORAP35398 523 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 PGDP52209 483 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 YBX1P67809 324 aaKnown RBP6.83□□□□□ -1.32
LSM8-204ENST00000424702 DNASE1L3Q13609 305 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 SELPLGQ14242 412 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 NSDHLQ15738 373 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 ABHD17CQ6PCB6 329 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 ZNF551Q7Z340 670 aaPredicted RBP6.83□□□□□ -1.32
LSM8-204ENST00000424702 ZDHHC21Q8IVQ6 265 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 CCDC116Q8IYX3 515 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 ABCA7Q8IZY2 2146 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 DTWD1Q8N5C7 304 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 OR52N2Q8NGI0 321 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 CPPED1Q9BRF8 314 aaPredicted RBP6.83□□□□□ -1.32
LSM8-204ENST00000424702 OSBPL11Q9BXB4 747 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 PAIP1Q9H074 479 aaKnown RBP6.83□□□□□ -1.32
LSM8-204ENST00000424702 PRDM9Q9NQV7 894 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 RXFP3Q9NSD7 469 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 C5AR2Q9P296 337 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 DNAJB9Q9UBS3 223 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 SEC14L3Q9UDX4 400 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 MKL2Q9ULH7 1088 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 SAMHD1Q9Y3Z3 626 aaKnown RBP6.83□□□□□ -1.32
LSM8-204ENST00000424702 BPTFQ12830 3046 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 CABIN1Q9Y6J0 2220 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 ZFC3H1O60293 1989 aaKnown RBP6.83□□□□□ -1.32
LSM8-204ENST00000424702 BRCA2P51587 3418 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 IGHV5-10-1A0A0J9YXX1 117 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 C21orf140B9A014 251 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 PRAMEF2O60811 474 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 RRM2P31350 389 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 LSSP48449 732 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 DCAF7P61962 342 aa6.83□□□□□ -1.32
LSM8-204ENST00000424702 EPS8Q12929 822 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms