RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NKX3-1Q99801 234 aaPredicted RBP8.4□□□□□ -1.07
RTN4-206ENST00000394611 ANKHQ9HCJ1 492 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 KCTD5Q9NXV2 234 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 PFDN2Q9UHV9 154 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 MAN2B2Q9Y2E5 1009 aa8.4□□□□□ -1.07
RTN4-206ENST00000394611 FAM171A2A8MVW0 826 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 LATO43561 262 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 RAD1O60671 282 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 KCNK5O95279 499 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 NTN1O95631 604 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 RETP07949 1114 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 OR12D1P0DN82 309 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 ATF6P18850 670 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SLC6A4P31645 630 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 NAA10P41227 235 aaPredicted RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 ERVFC1P60507 584 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 DSTNP60981 165 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 LSM11P83369 360 aaKnown RBP eCLIP8.39□□□□□ -1.07
RTN4-206ENST00000394611 CDC42EP1Q00587 391 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 BNC1Q01954 994 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 FBXO43Q4G163 708 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 Q5BKY6 102 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 ZNF311Q5JNZ3 666 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 TMCO2Q7Z6W1 182 aaPredicted RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 THOC6Q86W42 341 aaKnown RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 FAM9CQ8IZT9 166 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 OR6K6Q8NGW6 343 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SCRN2Q96FV2 425 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SNX18Q96RF0 628 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 PSD2Q9BQI7 771 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 BRINP2Q9C0B6 783 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SEC14L4Q9UDX3 406 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 A0A1B0GV50 99 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 A0A1B0GVT2 93 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 H3BQ06 376 aaPredicted RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 URODP06132 367 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 MMP2P08253 660 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 IL3P08700 152 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 HNF1BP35680 557 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SCNN1AP37088 669 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SSR2P43308 183 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 HNMTP50135 292 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 RGS8P57771 180 aaPredicted RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 SRSF11Q05519 484 aaKnown RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 EIF2B5Q13144 721 aaKnown RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 RGNQ15493 299 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 DUSP7Q16829 419 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 UBXN11Q5T124 520 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 KDM4DQ6B0I6 523 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SBSNQ6UWP8 590 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 OR51A7Q8NH64 312 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 GRHL3Q8TE85 626 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 DPF3Q92784 378 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 PPP1R16AQ96I34 528 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SLA2Q9H6Q3 261 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 METTL17Q9H7H0 456 aaPredicted RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 IL26Q9NPH9 171 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 STUB1Q9UNE7 303 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 COPS3Q9UNS2 423 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 KNTC1P50748 2209 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 FEZF1A0PJY2 475 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 ANKRD61A6NGH8 418 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 CLDN24A6NM45 220 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 CSO75390 466 aaKnown RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 IGSF6O95976 241 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 CSF3P09919 207 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 FBXO45P0C2W1 286 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 EBLN1P0CF75 366 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 PTHLHP12272 177 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 CBR1P16152 277 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 MAPKAPK2P49137 400 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 ERVK-25P63136 954 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 RBBP4Q09028 425 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 CAMK1Q14012 370 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 TBCEQ15813 527 aaPredicted RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 FAM26DQ5JW98 314 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 SAXO2Q658L1 398 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 C18orf63Q68DL7 685 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 RAET1GQ6H3X3 334 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 ZNF367Q7RTV3 350 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 CMTM8Q8IZV2 173 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 NXPE1Q8N323 547 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 TEX19Q8NA77 164 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 HUS1BQ8NHY5 278 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 SLX1AQ9BQ83 275 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 GULP1Q9UBP9 304 aa8.39□□□□□ -1.07
RTN4-206ENST00000394611 RUVBL1Q9Y265 456 aaKnown RBP8.39□□□□□ -1.07
RTN4-206ENST00000394611 DAPL1A0PJW8 107 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 TAPBPO15533 448 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 SLC16A8O95907 504 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 YBEYP58557 167 aaPredicted RBP8.38□□□□□ -1.07
RTN4-206ENST00000394611 TCTN1Q2MV58 587 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 ZNF697Q5TEC3 545 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 OLFML2AQ68BL7 652 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 FRMPD2BQ6IN97 320 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 AGTRAPQ6RW13 159 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 UNC5DQ6UXZ4 953 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 GRAMD2AQ8IUY3 354 aa8.38□□□□□ -1.07
RTN4-206ENST00000394611 ZFP82Q8N141 532 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms