RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 SLC25A25Q6KCM7 469 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 NOXRED1Q6NXP6 359 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 DDIASQ8IXT1 998 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 VWA5B2Q8N398 1253 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 C17orf47Q8NEP4 570 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 GRHL3Q8TE85 626 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 SGCZQ96LD1 299 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 PPP3R2Q96LZ3 170 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 SIGLEC12Q96PQ1 595 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 EBPLQ9BY08 206 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 TIMMDC1Q9NPL8 285 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 HPF1Q9NWY4 346 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 ANKRD10Q9NXR5 420 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 NKIRAS1Q9NYS0 192 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.18■□□□□ 0.34
CHTOP-202ENST00000368687 FIS1Q9Y3D6 152 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 NME2P1O60361 137 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 BCAS2O75934 225 aaPredicted RBP17.17■□□□□ 0.34
CHTOP-202ENST00000368687 EDN3P14138 238 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 NME2P22392 152 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 MPIP34949 423 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 SLC37A1P57057 533 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 MAP4K2Q12851 820 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 CHI3L2Q15782 390 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 SPINK14Q6IE38 97 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 AMER2Q8N7J2 671 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 GOLM1Q8NBJ4 401 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 POGLUT1Q8NBL1 392 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 ST6GALNAC3Q8NDV1 305 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 ZNF675Q8TD23 568 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 ZNF764Q96H86 408 aaPredicted RBP17.17■□□□□ 0.34
CHTOP-202ENST00000368687 RASL10BQ96S79 203 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 TMBIM4Q9HC24 238 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 TAS2R7Q9NYW3 318 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 ERVK-11Q9UQG0 969 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 SVILO95425 2214 aa17.17■□□□□ 0.34
CHTOP-202ENST00000368687 HECTD1Q9ULT8 2610 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 TMEM120BA0PK00 339 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 TMEM200CA6NKL6 621 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 WASHC1A8K0Z3 465 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 CAPN14A8MX76 684 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 KLRC4-KLRK1H3BQV0 150 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 LSM1O15116 133 aaKnown RBP17.16■□□□□ 0.34
CHTOP-202ENST00000368687 PRKNO60260 465 aaPredicted RBP17.16■□□□□ 0.34
CHTOP-202ENST00000368687 ASMTP46597 345 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 ABCE1P61221 599 aaKnown RBP17.16■□□□□ 0.34
CHTOP-202ENST00000368687 PSPHP78330 225 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 KIAA0040Q15053 153 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 CEBPEQ15744 281 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 UGT3A2Q3SY77 523 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 ATP6AP1LQ52LC2 224 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 HLA-DQA1Q5Y7H0 255 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 TRIM42Q8IWZ5 723 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 C9orf40Q8IXQ3 194 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 TAGAPQ8N103 731 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 ZNF321PQ8N8H1 164 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.16■□□□□ 0.343e-11■■□□□ 12.7
CHTOP-202ENST00000368687 RAB3IL1Q8TBN0 382 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 NR4A3Q92570 626 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 TP53INP1Q96A56 240 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 TLCD1Q96CP7 247 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 C19orf60Q96EN9 201 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 FCRL1Q96LA6 429 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 SLX1AQ9BQ83 275 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 WWTR1Q9GZV5 400 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 TUBB1Q9H4B7 451 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 SLC35C2Q9NQQ7 365 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 HEY2Q9UBP5 337 aa17.16■□□□□ 0.34
CHTOP-202ENST00000368687 POLR3HQ9Y535 204 aaPredicted RBP17.16■□□□□ 0.34
CHTOP-202ENST00000368687 ASPDHA6ND91 283 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 TCP11X1B4DZS4 312 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 WWP2O00308 870 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 PIP5K1BO14986 540 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 LINC00032P0C843 101 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 NTSP30990 170 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 FEN1P39748 380 aaKnown RBP17.15■□□□□ 0.34
CHTOP-202ENST00000368687 TMED10P49755 219 aaKnown RBP17.15■□□□□ 0.34
CHTOP-202ENST00000368687 NRG3P56975 720 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 MAGOHP61326 146 aaKnown RBP17.15■□□□□ 0.34
CHTOP-202ENST00000368687 C2orf80Q0P641 193 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 EBPQ15125 230 aaKnown RBP17.15■□□□□ 0.34
CHTOP-202ENST00000368687 MAPKAPK3Q16644 382 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 PRICKLE4Q2TBC4 344 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 XKR7Q5GH72 579 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 PIGGQ5H8A4 983 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 AGBL2Q5U5Z8 902 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 FAM71E1Q6IPT2 247 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 DGAT2L6Q6ZPD8 337 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 RTL4Q6ZR62 310 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 Q6ZSR9 355 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 HDXQ7Z353 690 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 GOLGA6L1Q8N7Z2 621 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 UCN3Q969E3 161 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 CNRIP1Q96F85 164 aaPredicted RBP17.15■□□□□ 0.34
CHTOP-202ENST00000368687 ZNF681Q96N22 645 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 GAL3ST4Q96RP7 486 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 BRINP2Q9C0B6 783 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 OR10A5Q9H207 317 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 VIPAS39Q9H9C1 493 aa17.15■□□□□ 0.34
CHTOP-202ENST00000368687 KLHL1Q9NR64 748 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms