RNA–Protein interactions for RNA: YLR301W

HRI1, Transcript of Protein of unknown function that interacts with Sec72p and Hrr25p, yeast

Gene HRI1, Length 735 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRI1	YLR301W	NCS6	P53088	359 aa		4.36	□□□□□ -1.71
HRI1	YLR301W	ENB1	Q08299	606 aa		4.36	□□□□□ -1.71
HRI1	YLR301W	NPC2	Q12408	173 aa		4.36	□□□□□ -1.71
HRI1	YLR301W	OAR1	P35731	278 aa		4.35	□□□□□ -1.71
HRI1	YLR301W	SAH1	P39954	449 aa	Known RBP	4.35	□□□□□ -1.71
HRI1	YLR301W	YGR053C	P53234	283 aa		4.35	□□□□□ -1.71
HRI1	YLR301W	PPM2	Q08282	695 aa		4.35	□□□□□ -1.71
HRI1	YLR301W	LAS17	Q12446	633 aa		4.35	□□□□□ -1.71
HRI1	YLR301W	ATG19	P35193	415 aa		4.34	□□□□□ -1.71
HRI1	YLR301W	ESC2	Q06340	456 aa		4.34	□□□□□ -1.71
HRI1	YLR301W	MOH1	P38191	138 aa		4.33	□□□□□ -1.72
HRI1	YLR301W	NPP2	P39997	493 aa		4.33	□□□□□ -1.72
HRI1	YLR301W	GUP2	Q08929	609 aa		4.33	□□□□□ -1.72
HRI1	YLR301W	KAR4	P25583	335 aa		4.32	□□□□□ -1.72
HRI1	YLR301W	EFT1	P32324	842 aa	Known RBP	4.32	□□□□□ -1.72
HRI1	YLR301W	RPC82	P32349	654 aa		4.32	□□□□□ -1.72
HRI1	YLR301W	CDC12	P32468	407 aa	Known RBP	4.32	□□□□□ -1.72
HRI1	YLR301W	ABD1	P32783	436 aa	Predicted RBP	4.32	□□□□□ -1.72
HRI1	YLR301W	SFB2	P53953	876 aa		4.32	□□□□□ -1.72
HRI1	YLR301W	SRP1	Q02821	542 aa	Known RBP	4.32	□□□□□ -1.72
HRI1	YLR301W	WHI4	Q07655	649 aa	Known RBP	4.32	□□□□□ -1.72
HRI1	YLR301W	FAA4	P47912	694 aa	Known RBP	4.31	□□□□□ -1.72
HRI1	YLR301W	BUL1	P48524	976 aa		4.31	□□□□□ -1.72
HRI1	YLR301W	MBP1	P39678	833 aa		4.3	□□□□□ -1.72
HRI1	YLR301W	KRI1	P42846	591 aa	Known RBP	4.3	□□□□□ -1.72
HRI1	YLR301W	UBA2	P52488	636 aa		4.3	□□□□□ -1.72
HRI1	YLR301W	YLR040C	Q07988	224 aa		4.3	□□□□□ -1.72
HRI1	YLR301W	SBA1	P28707	216 aa	Known RBP	4.29	□□□□□ -1.72
HRI1	YLR301W	GYP7	P48365	746 aa		4.29	□□□□□ -1.72
HRI1	YLR301W	GDE1	Q02979	1223 aa		4.29	□□□□□ -1.72
HRI1	YLR301W	YOL073C	Q08232	322 aa		4.29	□□□□□ -1.72
HRI1	YLR301W	UPC2	Q12151	913 aa		4.29	□□□□□ -1.72
HRI1	YLR301W	CAD1	P24813	409 aa	Known RBP	4.28	□□□□□ -1.72
HRI1	YLR301W	AGP1	P25376	633 aa		4.28	□□□□□ -1.72
HRI1	YLR301W	KTR4	P38131	464 aa		4.28	□□□□□ -1.72
HRI1	YLR301W	SUL1	P38359	859 aa		4.28	□□□□□ -1.72
HRI1	YLR301W	YML122C	Q03207	126 aa		4.28	□□□□□ -1.72
HRI1	YLR301W	DUS3	Q06053	668 aa	Known RBP	4.28	□□□□□ -1.72
HRI1	YLR301W	STE14	P32584	239 aa		4.27	□□□□□ -1.73
HRI1	YLR301W	YKR078W	P36158	585 aa	Known RBP	4.27	□□□□□ -1.73
HRI1	YLR301W	PAM1	P37304	830 aa	Known RBP	4.27	□□□□□ -1.73
HRI1	YLR301W	YPR196W	Q06595	470 aa		4.27	□□□□□ -1.73
HRI1	YLR301W	ERG4	P25340	473 aa		4.26	□□□□□ -1.73
HRI1	YLR301W	SED4	P25365	1065 aa		4.26	□□□□□ -1.73
HRI1	YLR301W	YER158C	P40095	573 aa		4.26	□□□□□ -1.73
HRI1	YLR301W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
HRI1	YLR301W	RAI1	P53063	387 aa	Known RBP	4.26	□□□□□ -1.73
HRI1	YLR301W	SNU71	P53207	620 aa	Known RBP	4.26	□□□□□ -1.73
HRI1	YLR301W	FAL1	Q12099	399 aa	Known RBP	4.26	□□□□□ -1.73
HRI1	YLR301W	TRP4	P07285	380 aa	Predicted RBP	4.25	□□□□□ -1.73
HRI1	YLR301W	TSL1	P38427	1098 aa	Known RBP	4.25	□□□□□ -1.73
HRI1	YLR301W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
HRI1	YLR301W	CLN2	P20438	545 aa		4.24	□□□□□ -1.73
HRI1	YLR301W	VBA5	P36172	582 aa		4.24	□□□□□ -1.73
HRI1	YLR301W	YKE2	P52553	114 aa		4.24	□□□□□ -1.73
HRI1	YLR301W	TMN2	Q04562	672 aa		4.24	□□□□□ -1.73
HRI1	YLR301W	CDC48	P25694	835 aa	Known RBP	4.23	□□□□□ -1.73
HRI1	YLR301W	YBR238C	P38330	731 aa	Known RBP	4.23	□□□□□ -1.73
HRI1	YLR301W	STB4	P50104	949 aa		4.23	□□□□□ -1.73
HRI1	YLR301W	SLU7	Q02775	382 aa	Known RBP	4.23	□□□□□ -1.73
HRI1	YLR301W	SHE9	Q04172	456 aa		4.23	□□□□□ -1.73
HRI1	YLR301W	OMS1	Q06668	471 aa		4.23	□□□□□ -1.73
HRI1	YLR301W	MCH5	Q08777	521 aa		4.23	□□□□□ -1.73
HRI1	YLR301W	NOT3	P06102	836 aa	Known RBP	4.22	□□□□□ -1.73
HRI1	YLR301W	MAD1	P40957	749 aa		4.22	□□□□□ -1.73
HRI1	YLR301W	CWC24	P53769	259 aa		4.22	□□□□□ -1.73
HRI1	YLR301W	ERG5	P54781	538 aa		4.22	□□□□□ -1.73
HRI1	YLR301W	RNT1	Q02555	471 aa		4.22	□□□□□ -1.73
HRI1	YLR301W	YDR306C	Q06640	478 aa		4.22	□□□□□ -1.73
HRI1	YLR301W	OPI10	Q08202	246 aa		4.22	□□□□□ -1.73
HRI1	YLR301W	PIN2	Q12057	282 aa		4.22	□□□□□ -1.73
HRI1	YLR301W	ACF2	Q12168	779 aa		4.22	□□□□□ -1.73
HRI1	YLR301W	NAP1	P25293	417 aa	Known RBP	4.21	□□□□□ -1.74
HRI1	YLR301W	NPP1	P25353	742 aa		4.21	□□□□□ -1.74
HRI1	YLR301W	PPH3	P32345	308 aa		4.21	□□□□□ -1.74
HRI1	YLR301W	STE13	P33894	931 aa		4.21	□□□□□ -1.74
HRI1	YLR301W	QRI1	P43123	477 aa	Known RBP	4.21	□□□□□ -1.74
HRI1	YLR301W	STU2	P46675	888 aa		4.21	□□□□□ -1.74
HRI1	YLR301W	VPS16	Q03308	798 aa		4.21	□□□□□ -1.74
HRI1	YLR301W	SSL1	Q04673	461 aa	Predicted RBP	4.21	□□□□□ -1.74
HRI1	YLR301W	SVF1	Q05515	481 aa		4.21	□□□□□ -1.74
HRI1	YLR301W	ADE8	P04161	214 aa		4.2	□□□□□ -1.74
HRI1	YLR301W	ALG7	P07286	448 aa		4.2	□□□□□ -1.74
HRI1	YLR301W	FBP1	P09201	348 aa		4.2	□□□□□ -1.74
HRI1	YLR301W	AFR1	P33304	620 aa		4.2	□□□□□ -1.74
HRI1	YLR301W	YMR206W	Q03695	313 aa		4.2	□□□□□ -1.74
HRI1	YLR301W	TRM13	Q12383	476 aa		4.2	□□□□□ -1.74
HRI1	YLR301W	PPR1	P07272	904 aa	Predicted RBP	4.19	□□□□□ -1.74
HRI1	YLR301W	SEC21	P32074	935 aa	Known RBP	4.19	□□□□□ -1.74
HRI1	YLR301W	YKL069W	P36088	180 aa		4.19	□□□□□ -1.74
HRI1	YLR301W	TIM44	Q01852	431 aa		4.19	□□□□□ -1.74
HRI1	YLR301W	VPS30	Q02948	557 aa		4.19	□□□□□ -1.74
HRI1	YLR301W	PEX19	Q07418	342 aa		4.19	□□□□□ -1.74
HRI1	YLR301W	IRC10	Q08118	586 aa		4.19	□□□□□ -1.74
HRI1	YLR301W	AAR2	P32357	355 aa	Predicted RBP	4.18	□□□□□ -1.74
HRI1	YLR301W	MRP8	P35719	219 aa		4.18	□□□□□ -1.74
HRI1	YLR301W	SIT1	P39980	628 aa		4.18	□□□□□ -1.74
HRI1	YLR301W	SDP1	P40479	209 aa		4.18	□□□□□ -1.74
HRI1	YLR301W	JIP5	Q06214	492 aa	Predicted RBP	4.18	□□□□□ -1.74
HRI1	YLR301W	PRI2	P20457	528 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 105.2 ms