RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS34	YLR240W	TY1B-GR3	Q12316	1755 aa		2.74	□□□□□ -1.97
VPS34	YLR240W	TY1B-OR	Q92393	1755 aa		2.74	□□□□□ -1.97
VPS34	YLR240W	RAD4	P14736	754 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	GIC1	P38785	314 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	SIT1	P39980	628 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	TPO2	P53283	614 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	MSC2	Q03455	724 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	FMP25	Q08023	583 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	SRM1	P21827	482 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	RNQ1	P25367	405 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	APL1	P27351	700 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	FUN30	P31380	1131 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	ERP6	P53198	216 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	SRT1	Q03175	343 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	YDR132C	Q03900	495 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	SGD1	Q06132	899 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	YDR306C	Q06640	478 aa		2.73	□□□□□ -1.97
VPS34	YLR240W	RPL8B	P29453	256 aa	Known RBP	2.72	□□□□□ -1.97
VPS34	YLR240W	HBS1	P32769	611 aa	Known RBP	2.72	□□□□□ -1.97
VPS34	YLR240W	UFD4	P33202	1483 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	OCA5	P38738	679 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	YAP1801	P38856	637 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	SAH1	P39954	449 aa	Known RBP	2.72	□□□□□ -1.97
VPS34	YLR240W	SPO75	Q07798	868 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	XYL2	Q07993	356 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	SOD2	P00447	233 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	GAL10	P04397	699 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	CMP2	P14747	604 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	PRP6	P19735	899 aa	Predicted RBP	2.72	□□□□□ -1.97
VPS34	YLR240W	UTP8	P53276	713 aa	Known RBP	2.72	□□□□□ -1.97
VPS34	YLR240W	BDF2	Q07442	638 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	CDC25	P04821	1589 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	PPH3	P32345	308 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	AFR1	P33304	620 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	YKR078W	P36158	585 aa	Known RBP	2.72	□□□□□ -1.97
VPS34	YLR240W	AIM3	P38266	947 aa	Known RBP	2.72	□□□□□ -1.97
VPS34	YLR240W	YHR020W	P38708	688 aa	Known RBP	2.72	□□□□□ -1.97
VPS34	YLR240W	LAM1	P38851	1228 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	NPP2	P39997	493 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	IRC24	P40580	263 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	ALR2	P43553	858 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	TIM54	P47045	478 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	RIM8	P53179	542 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	OSW2	Q12202	724 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	OSH2	Q12451	1283 aa		2.72	□□□□□ -1.97
VPS34	YLR240W	RPS13	P05756	151 aa	Known RBP	2.71	□□□□□ -1.98
VPS34	YLR240W	AAR2	P32357	355 aa	Predicted RBP	2.71	□□□□□ -1.98
VPS34	YLR240W	SCT1	P32784	759 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	TSL1	P38427	1098 aa	Known RBP	2.71	□□□□□ -1.98
VPS34	YLR240W	IOC3	P43596	787 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	GYP7	P48365	746 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	GCN5	Q03330	439 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	BUL2	Q03758	920 aa	Known RBP	2.71	□□□□□ -1.98
VPS34	YLR240W	NSE3	Q05541	303 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	EAF1	Q06337	982 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	YOR352W	Q08816	343 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
VPS34	YLR240W	HSP60	P19882	572 aa	Known RBP	2.71	□□□□□ -1.98
VPS34	YLR240W	RPC82	P32349	654 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	ECM21	P38167	1117 aa	Known RBP	2.71	□□□□□ -1.98
VPS34	YLR240W	YER158C	P40095	573 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	PLB2	Q03674	706 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	YOL098C	Q12496	1037 aa		2.71	□□□□□ -1.98
VPS34	YLR240W	SNQ2	P32568	1501 aa	Known RBP	2.7	□□□□□ -1.98
VPS34	YLR240W	NPP1	P25353	742 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	CDC11	P32458	415 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	THI80	P35202	319 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	YBR238C	P38330	731 aa	Known RBP	2.7	□□□□□ -1.98
VPS34	YLR240W	CCC2	P38995	1004 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	MEF2	P39677	819 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	MND2	P40577	368 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	HUL5	P53119	910 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	ROT1	Q03691	256 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	DUS4	Q06063	367 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	UBX5	Q06682	500 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	YPL277C	Q08989	487 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	ESC1	Q03661	1658 aa	Known RBP	2.7	□□□□□ -1.98
VPS34	YLR240W	STH1	P32597	1359 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	NUP170	P38181	1502 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	ADE8	P04161	214 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	CDC6	P09119	513 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
VPS34	YLR240W	ARE1	P25628	610 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	DOM34	P33309	386 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	YKE2	P52553	114 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	YGR125W	P53273	1036 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	PBP1	P53297	722 aa	Known RBP	2.7	□□□□□ -1.98
VPS34	YLR240W	FLC1	Q08967	793 aa		2.7	□□□□□ -1.98
VPS34	YLR240W	NTE1	Q04958	1679 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	CIT1	P00890	479 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	CDC48	P25694	835 aa	Known RBP	2.69	□□□□□ -1.98
VPS34	YLR240W	ZRG8	P40021	1076 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	YGR012W	P53206	393 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	SFB2	P53953	876 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
VPS34	YLR240W	TAF8	Q03750	510 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	LCD1	Q04377	747 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	CDA1	Q06702	301 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	CDC53	Q12018	815 aa	Known RBP	2.69	□□□□□ -1.98
VPS34	YLR240W	TY1B-JR2	P47100	1755 aa	Known RBP	2.69	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 115.6 ms