RNA–Protein interactions for RNA: YLL002W

RTT109, Transcript of Histone acetyltransferase, yeast

Gene RTT109, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT109	YLL002W	MRP8	P35719	219 aa		4.69	□□□□□ -1.66
RTT109	YLL002W	RPN3	P40016	523 aa	Known RBP	4.69	□□□□□ -1.66
RTT109	YLL002W	YPL066W	Q12194	479 aa		4.69	□□□□□ -1.66
RTT109	YLL002W	RAD4	P14736	754 aa		4.68	□□□□□ -1.66
RTT109	YLL002W	VBA5	P36172	582 aa		4.68	□□□□□ -1.66
RTT109	YLL002W	PTC7	P38797	343 aa		4.68	□□□□□ -1.66
RTT109	YLL002W	GTS1	P40956	396 aa		4.68	□□□□□ -1.66
RTT109	YLL002W	OYE3	P41816	400 aa	Predicted RBP	4.68	□□□□□ -1.66
RTT109	YLL002W	TIM54	P47045	478 aa		4.68	□□□□□ -1.66
RTT109	YLL002W	SHE9	Q04172	456 aa		4.68	□□□□□ -1.66
RTT109	YLL002W	STH1	P32597	1359 aa		4.68	□□□□□ -1.66
RTT109	YLL002W	ADP1	P25371	1049 aa		4.67	□□□□□ -1.66
RTT109	YLL002W	AIM26	P32858	118 aa		4.67	□□□□□ -1.66
RTT109	YLL002W	SPO75	Q07798	868 aa		4.67	□□□□□ -1.66
RTT109	YLL002W	CDC53	Q12018	815 aa	Known RBP	4.67	□□□□□ -1.66
RTT109	YLL002W	OSH2	Q12451	1283 aa		4.67	□□□□□ -1.66
RTT109	YLL002W	YOL098C	Q12496	1037 aa		4.67	□□□□□ -1.66
RTT109	YLL002W	SEC3	P33332	1336 aa	Known RBP	4.66	□□□□□ -1.66
RTT109	YLL002W	RPL11A	P0C0W9	174 aa	Known RBP	4.66	□□□□□ -1.66
RTT109	YLL002W	SRO9	P25567	434 aa	Known RBP	4.66	□□□□□ -1.66
RTT109	YLL002W	SRP40	P32583	406 aa	Predicted RBP	4.66	□□□□□ -1.66
RTT109	YLL002W	PBY1	P38254	753 aa		4.66	□□□□□ -1.66
RTT109	YLL002W	MBP1	P39678	833 aa		4.66	□□□□□ -1.66
RTT109	YLL002W	IRR1	P40541	1150 aa		4.66	□□□□□ -1.66
RTT109	YLL002W	ECL1	P48235	211 aa		4.66	□□□□□ -1.66
RTT109	YLL002W	FOL2	P51601	243 aa	Known RBP	4.66	□□□□□ -1.66
RTT109	YLL002W	TPO2	P53283	614 aa		4.66	□□□□□ -1.66
RTT109	YLL002W	DUS1	P53759	423 aa	Known RBP	4.66	□□□□□ -1.66
RTT109	YLL002W	SSY1	Q03770	852 aa		4.66	□□□□□ -1.66
RTT109	YLL002W	YOR131C	Q12486	218 aa		4.66	□□□□□ -1.66
RTT109	YLL002W	RPL11B	Q3E757	174 aa	Predicted RBP	4.66	□□□□□ -1.66
RTT109	YLL002W	DFG16	Q99234	619 aa		4.66	□□□□□ -1.66
RTT109	YLL002W	SMC4	Q12267	1418 aa		4.65	□□□□□ -1.67
RTT109	YLL002W	SAM35	P14693	329 aa		4.65	□□□□□ -1.67
RTT109	YLL002W	PRP9	P19736	530 aa	Known RBP	4.65	□□□□□ -1.67
RTT109	YLL002W	YBR184W	P38299	523 aa		4.65	□□□□□ -1.67
RTT109	YLL002W	MXR1	P40029	184 aa		4.65	□□□□□ -1.67
RTT109	YLL002W	NIT1	P40447	199 aa		4.65	□□□□□ -1.67
RTT109	YLL002W	ACM1	Q08981	209 aa		4.65	□□□□□ -1.67
RTT109	YLL002W	PDR11	P40550	1411 aa		4.64	□□□□□ -1.67
RTT109	YLL002W	UGA2	P38067	497 aa		4.64	□□□□□ -1.67
RTT109	YLL002W	PIK1	P39104	1066 aa		4.64	□□□□□ -1.67
RTT109	YLL002W	ERP6	P53198	216 aa		4.64	□□□□□ -1.67
RTT109	YLL002W	RCL1	Q08096	367 aa	Predicted RBP	4.64	□□□□□ -1.67
RTT109	YLL002W	SPT7	P35177	1332 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	THS1	P04801	734 aa	Known RBP	4.63	□□□□□ -1.67
RTT109	YLL002W	SPS1	P08458	490 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	GAS1	P22146	559 aa	Known RBP	4.63	□□□□□ -1.67
RTT109	YLL002W	ARE1	P25628	610 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	PPH3	P32345	308 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	YKL091C	P33324	310 aa	Known RBP	4.63	□□□□□ -1.67
RTT109	YLL002W	OCA5	P38738	679 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	PEX7	P39108	375 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	GEM1	P39722	662 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	SIP5	P40210	489 aa	Known RBP	4.63	□□□□□ -1.67
RTT109	YLL002W	YFL054C	P43549	646 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	YGR125W	P53273	1036 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	EAF1	Q06337	982 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	YDR306C	Q06640	478 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	RSC58	Q07979	502 aa		4.63	□□□□□ -1.67
RTT109	YLL002W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
RTT109	YLL002W	SNF5	P18480	905 aa		4.62	□□□□□ -1.67
RTT109	YLL002W	AAR2	P32357	355 aa	Predicted RBP	4.62	□□□□□ -1.67
RTT109	YLL002W	STE5	P32917	917 aa		4.62	□□□□□ -1.67
RTT109	YLL002W	HSP78	P33416	811 aa		4.62	□□□□□ -1.67
RTT109	YLL002W	PNT1	P38969	423 aa		4.62	□□□□□ -1.67
RTT109	YLL002W	SAH1	P39954	449 aa	Known RBP	4.62	□□□□□ -1.67
RTT109	YLL002W	ALR2	P43553	858 aa		4.62	□□□□□ -1.67
RTT109	YLL002W	TAF1	P46677	1066 aa		4.62	□□□□□ -1.67
RTT109	YLL002W	SRP1	Q02821	542 aa	Known RBP	4.62	□□□□□ -1.67
RTT109	YLL002W	NSE3	Q05541	303 aa		4.62	□□□□□ -1.67
RTT109	YLL002W	DUS3	Q06053	668 aa	Known RBP	4.62	□□□□□ -1.67
RTT109	YLL002W	PDR5	P33302	1511 aa	Known RBP	4.62	□□□□□ -1.67
RTT109	YLL002W	HSP60	P19882	572 aa	Known RBP	4.61	□□□□□ -1.67
RTT109	YLL002W	DBP2	P24783	546 aa	Known RBP	4.61	□□□□□ -1.67
RTT109	YLL002W	SCT1	P32784	759 aa		4.61	□□□□□ -1.67
RTT109	YLL002W	BAP2	P38084	609 aa		4.61	□□□□□ -1.67
RTT109	YLL002W	HUL5	P53119	910 aa		4.61	□□□□□ -1.67
RTT109	YLL002W	BDF2	Q07442	638 aa		4.61	□□□□□ -1.67
RTT109	YLL002W	FMP25	Q08023	583 aa		4.61	□□□□□ -1.67
RTT109	YLL002W	RPL8B	P29453	256 aa	Known RBP	4.6	□□□□□ -1.67
RTT109	YLL002W	CCC2	P38995	1004 aa		4.6	□□□□□ -1.67
RTT109	YLL002W	IOC3	P43596	787 aa		4.6	□□□□□ -1.67
RTT109	YLL002W	SVS1	Q12254	260 aa		4.6	□□□□□ -1.67
RTT109	YLL002W	BI4	P03879	638 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	CDC11	P32458	415 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	SLA2	P33338	968 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	MAL31	P38156	614 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	RFC5	P38251	354 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	TAT2	P38967	592 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	HUL4	P40985	892 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	ORC3	P54790	616 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	UBX5	Q06682	500 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	CDA2	Q06703	312 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	YOR352W	Q08816	343 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	FLC1	Q08967	793 aa		4.59	□□□□□ -1.67
RTT109	YLL002W	GEA1	P47102	1408 aa	Predicted RBP	4.59	□□□□□ -1.67
RTT109	YLL002W	GAL11	P19659	1081 aa		4.58	□□□□□ -1.68
RTT109	YLL002W	PRS1	P32895	427 aa	Known RBP	4.58	□□□□□ -1.68
RTT109	YLL002W	TSA1	P34760	196 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms