RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W GDE1Q02979 1223 aa3.47□□□□□ -1.85
MSL1YIR009W PFK1P16861 987 aaKnown RBP3.46□□□□□ -1.86
MSL1YIR009W SBA1P28707 216 aaKnown RBP3.46□□□□□ -1.86
MSL1YIR009W CCC2P38995 1004 aa3.46□□□□□ -1.86
MSL1YIR009W MBP1P39678 833 aa3.46□□□□□ -1.86
MSL1YIR009W PSP2P50109 593 aaKnown RBP3.46□□□□□ -1.86
MSL1YIR009W NCS6P53088 359 aa3.46□□□□□ -1.86
MSL1YIR009W SFB2P53953 876 aa3.46□□□□□ -1.86
MSL1YIR009W NPC2Q12408 173 aa3.46□□□□□ -1.86
MSL1YIR009W LAS17Q12446 633 aa3.46□□□□□ -1.86
MSL1YIR009W RAD53P22216 821 aa3.45□□□□□ -1.86
MSL1YIR009W AGP1P25376 633 aa3.45□□□□□ -1.86
MSL1YIR009W HRR25P29295 494 aaKnown RBP3.45□□□□□ -1.86
MSL1YIR009W SRP1Q02821 542 aaKnown RBP3.45□□□□□ -1.86
MSL1YIR009W WHI4Q07655 649 aaKnown RBP3.45□□□□□ -1.86
MSL1YIR009W ENB1Q08299 606 aa3.45□□□□□ -1.86
MSL1YIR009W CLN2P20438 545 aa3.44□□□□□ -1.86
MSL1YIR009W RPC82P32349 654 aa3.44□□□□□ -1.86
MSL1YIR009W ATG19P35193 415 aa3.44□□□□□ -1.86
MSL1YIR009W KRI1P42846 591 aaKnown RBP3.44□□□□□ -1.86
MSL1YIR009W GYP7P48365 746 aa3.44□□□□□ -1.86
MSL1YIR009W BUL1P48524 976 aa3.44□□□□□ -1.86
MSL1YIR009W VPS16Q03308 798 aa3.44□□□□□ -1.86
MSL1YIR009W AIM39Q08223 395 aa3.44□□□□□ -1.86
MSL1YIR009W PIN2Q12057 282 aa3.44□□□□□ -1.86
MSL1YIR009W FAL1Q12099 399 aaKnown RBP3.44□□□□□ -1.86
MSL1YIR009W KAR4P25583 335 aa3.43□□□□□ -1.86
MSL1YIR009W VBA5P36172 582 aa3.43□□□□□ -1.86
MSL1YIR009W GUS1P46655 708 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
MSL1YIR009W SHE9Q04172 456 aa3.43□□□□□ -1.86
MSL1YIR009W DUS3Q06053 668 aaKnown RBP3.43□□□□□ -1.86
MSL1YIR009W GUP2Q08929 609 aa3.43□□□□□ -1.86
MSL1YIR009W YKL069WP36088 180 aa3.42□□□□□ -1.86
MSL1YIR009W YKR078WP36158 585 aaKnown RBP3.42□□□□□ -1.86
MSL1YIR009W TSL1P38427 1098 aaKnown RBP3.42□□□□□ -1.86
MSL1YIR009W YER158CP40095 573 aa3.42□□□□□ -1.86
MSL1YIR009W OPI10Q08202 246 aa3.42□□□□□ -1.86
MSL1YIR009W UPC2Q12151 913 aa3.42□□□□□ -1.86
MSL1YIR009W NAP1P25293 417 aaKnown RBP3.41□□□□□ -1.86
MSL1YIR009W EFT1P32324 842 aaKnown RBP3.41□□□□□ -1.86
MSL1YIR009W STE14P32584 239 aa3.41□□□□□ -1.86
MSL1YIR009W OAR1P35731 278 aa3.41□□□□□ -1.86
MSL1YIR009W MOH1P38191 138 aa3.41□□□□□ -1.86
MSL1YIR009W MAD1P40957 749 aa3.41□□□□□ -1.86
MSL1YIR009W YKE2P52553 114 aa3.41□□□□□ -1.86
MSL1YIR009W RAI1P53063 387 aaKnown RBP3.41□□□□□ -1.86
MSL1YIR009W CWC24P53769 259 aa3.41□□□□□ -1.86
MSL1YIR009W YLR040CQ07988 224 aa3.41□□□□□ -1.86
MSL1YIR009W PPM2Q08282 695 aa3.41□□□□□ -1.86
MSL1YIR009W NPP1P25353 742 aa3.4□□□□□ -1.87
MSL1YIR009W AFR1P33304 620 aa3.4□□□□□ -1.87
MSL1YIR009W YBR238CP38330 731 aaKnown RBP3.4□□□□□ -1.87
MSL1YIR009W SVF1Q05515 481 aa3.4□□□□□ -1.87
MSL1YIR009W YPR196WQ06595 470 aa3.4□□□□□ -1.87
MSL1YIR009W PRI2P20457 528 aa3.39□□□□□ -1.87
MSL1YIR009W CDC48P25694 835 aaKnown RBP3.39□□□□□ -1.87
MSL1YIR009W YPT53P36019 220 aa3.39□□□□□ -1.87
MSL1YIR009W SLU7Q02775 382 aaKnown RBP3.39□□□□□ -1.87
MSL1YIR009W YDR306CQ06640 478 aa3.39□□□□□ -1.87
MSL1YIR009W NOT3P06102 836 aaKnown RBP3.38□□□□□ -1.87
MSL1YIR009W CAD1P24813 409 aaKnown RBP3.38□□□□□ -1.87
MSL1YIR009W SED4P25365 1065 aa3.38□□□□□ -1.87
MSL1YIR009W KTR4P38131 464 aa3.38□□□□□ -1.87
MSL1YIR009W JIP5Q06214 492 aaPredicted RBP3.38□□□□□ -1.87
MSL1YIR009W YOL073CQ08232 322 aa3.38□□□□□ -1.87
MSL1YIR009W TRP4P07285 380 aaPredicted RBP3.37□□□□□ -1.87
MSL1YIR009W FBP1P09201 348 aa3.37□□□□□ -1.87
MSL1YIR009W ERG4P25340 473 aa3.37□□□□□ -1.87
MSL1YIR009W PPH3P32345 308 aa3.37□□□□□ -1.87
MSL1YIR009W STE13P33894 931 aa3.37□□□□□ -1.87
MSL1YIR009W MRP8P35719 219 aa3.37□□□□□ -1.87
MSL1YIR009W SUL1P38359 859 aa3.37□□□□□ -1.87
MSL1YIR009W SIT1P39980 628 aa3.37□□□□□ -1.87
MSL1YIR009W SSL1Q04673 461 aaPredicted RBP3.37□□□□□ -1.87
MSL1YIR009W ADE8P04161 214 aa3.36□□□□□ -1.87
MSL1YIR009W AAR2P32357 355 aaPredicted RBP3.36□□□□□ -1.87
MSL1YIR009W PBY1P38254 753 aa3.36□□□□□ -1.87
MSL1YIR009W ERG5P54781 538 aa3.36□□□□□ -1.87
MSL1YIR009W BUL2Q03758 920 aaKnown RBP3.36□□□□□ -1.87
MSL1YIR009W SEC21P32074 935 aaKnown RBP3.35□□□□□ -1.87
MSL1YIR009W STE5P32917 917 aa3.35□□□□□ -1.87
MSL1YIR009W YRO2P38079 344 aa3.35□□□□□ -1.87
MSL1YIR009W SPF1P39986 1215 aaKnown RBP3.35□□□□□ -1.87
MSL1YIR009W IRR1P40541 1150 aa3.35□□□□□ -1.87
MSL1YIR009W UBA2P52488 636 aa3.35□□□□□ -1.87
MSL1YIR009W NOP7P53261 605 aaKnown RBP3.35□□□□□ -1.87
MSL1YIR009W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87 RIP-Chip
MSL1YIR009W TRM13Q12383 476 aa3.35□□□□□ -1.87
MSL1YIR009W RPD3P32561 433 aa3.34□□□□□ -1.87
MSL1YIR009W HBS1P32769 611 aaKnown RBP3.34□□□□□ -1.87
MSL1YIR009W ERT1P38140 529 aa3.34□□□□□ -1.87
MSL1YIR009W VAC8P39968 578 aa3.34□□□□□ -1.87
MSL1YIR009W SDP1P40479 209 aa3.34□□□□□ -1.87
MSL1YIR009W ALD6P54115 500 aaKnown RBP3.34□□□□□ -1.87
MSL1YIR009W OMS1Q06668 471 aa3.34□□□□□ -1.87
MSL1YIR009W CTF8P38877 133 aa3.33□□□□□ -1.88
MSL1YIR009W TOK1P40310 691 aa3.33□□□□□ -1.88
MSL1YIR009W PFD1P46988 109 aa3.33□□□□□ -1.88
MSL1YIR009W CCM1P48237 864 aaPredicted RBP3.33□□□□□ -1.88
MSL1YIR009W STB4P50104 949 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms