RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	RTA1	P53047	317 aa		2.93	□□□□□ -1.94
DOT6	YER088C	YGR125W	P53273	1036 aa		2.93	□□□□□ -1.94
DOT6	YER088C	SFB2	P53953	876 aa		2.93	□□□□□ -1.94
DOT6	YER088C	SRP1	Q02821	542 aa	Known RBP	2.93	□□□□□ -1.94
DOT6	YER088C	DUS4	Q06063	367 aa		2.93	□□□□□ -1.94
DOT6	YER088C	CDC53	Q12018	815 aa	Known RBP	2.93	□□□□□ -1.94
DOT6	YER088C	GAL10	P04397	699 aa		2.93	□□□□□ -1.94
DOT6	YER088C	THI80	P35202	319 aa		2.93	□□□□□ -1.94
DOT6	YER088C	YKR078W	P36158	585 aa	Known RBP	2.93	□□□□□ -1.94
DOT6	YER088C	RSM24	Q03976	319 aa		2.93	□□□□□ -1.94
DOT6	YER088C	ARE1	P25628	610 aa		2.92	□□□□□ -1.94
DOT6	YER088C	APL1	P27351	700 aa		2.92	□□□□□ -1.94
DOT6	YER088C	PET10	P36139	283 aa		2.92	□□□□□ -1.94
DOT6	YER088C	YBR284W	P38150	797 aa		2.92	□□□□□ -1.94
DOT6	YER088C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.92	□□□□□ -1.94	not detected
DOT6	YER088C	TOK1	P40310	691 aa		2.92	□□□□□ -1.94
DOT6	YER088C	NIT1	P40447	199 aa		2.92	□□□□□ -1.94
DOT6	YER088C	SNO2	P53823	222 aa		2.92	□□□□□ -1.94
DOT6	YER088C	CDA1	Q06702	301 aa		2.92	□□□□□ -1.94
DOT6	YER088C	OSH2	Q12451	1283 aa		2.92	□□□□□ -1.94
DOT6	YER088C	CIT2	P08679	460 aa		2.92	□□□□□ -1.94
DOT6	YER088C	CMP2	P14747	604 aa		2.92	□□□□□ -1.94
DOT6	YER088C	MSD1	P15179	658 aa	Known RBP	2.92	□□□□□ -1.94
DOT6	YER088C	RNQ1	P25367	405 aa		2.92	□□□□□ -1.94
DOT6	YER088C	AAR2	P32357	355 aa	Predicted RBP	2.92	□□□□□ -1.94
DOT6	YER088C	SRP40	P32583	406 aa	Predicted RBP	2.92	□□□□□ -1.94
DOT6	YER088C	LAM1	P38851	1228 aa		2.92	□□□□□ -1.94
DOT6	YER088C	CCC2	P38995	1004 aa		2.92	□□□□□ -1.94
DOT6	YER088C	MEF2	P39677	819 aa		2.92	□□□□□ -1.94
DOT6	YER088C	AVT1	P47082	602 aa		2.92	□□□□□ -1.94
DOT6	YER088C	FOL2	P51601	243 aa	Known RBP	2.92	□□□□□ -1.94
DOT6	YER088C	MAL11	P53048	616 aa		2.92	□□□□□ -1.94
DOT6	YER088C	LCD1	Q04377	747 aa		2.92	□□□□□ -1.94
DOT6	YER088C	SGD1	Q06132	899 aa		2.92	□□□□□ -1.94
DOT6	YER088C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.92	□□□□□ -1.94	not detected
DOT6	YER088C	YPR071W	Q12346	211 aa		2.92	□□□□□ -1.94
DOT6	YER088C	MYO2	P19524	1574 aa	Known RBP	2.91	□□□□□ -1.94
DOT6	YER088C	ADE8	P04161	214 aa		2.91	□□□□□ -1.94
DOT6	YER088C	KIN2	P13186	1147 aa	Known RBP	2.91	□□□□□ -1.94
DOT6	YER088C	PRP6	P19735	899 aa	Predicted RBP	2.91	□□□□□ -1.94
DOT6	YER088C	GAS1	P22146	559 aa	Known RBP	2.91	□□□□□ -1.94
DOT6	YER088C	PPH3	P32345	308 aa		2.91	□□□□□ -1.94
DOT6	YER088C	YER158C	P40095	573 aa		2.91	□□□□□ -1.94
DOT6	YER088C	MND2	P40577	368 aa		2.91	□□□□□ -1.94
DOT6	YER088C	UBP6	P43593	499 aa	Known RBP	2.91	□□□□□ -1.94
DOT6	YER088C	OSW2	Q12202	724 aa		2.91	□□□□□ -1.94
DOT6	YER088C	SOD2	P00447	233 aa		2.9	□□□□□ -1.94
DOT6	YER088C	ERR1	P0CX10	437 aa		2.9	□□□□□ -1.94
DOT6	YER088C	ERR2	P0CX11	437 aa		2.9	□□□□□ -1.94
DOT6	YER088C	CDC48	P25694	835 aa	Known RBP	2.9	□□□□□ -1.94
DOT6	YER088C	TIM23	P32897	222 aa		2.9	□□□□□ -1.94
DOT6	YER088C	YKL091C	P33324	310 aa	Known RBP	2.9	□□□□□ -1.94
DOT6	YER088C	YRO2	P38079	344 aa		2.9	□□□□□ -1.94
DOT6	YER088C	GCN5	Q03330	439 aa		2.9	□□□□□ -1.94
DOT6	YER088C	ROT1	Q03691	256 aa		2.9	□□□□□ -1.94
DOT6	YER088C	ADY3	Q07732	790 aa		2.9	□□□□□ -1.94
DOT6	YER088C	YPL277C	Q08989	487 aa		2.9	□□□□□ -1.94
DOT6	YER088C	MET5	P47169	1442 aa		2.9	□□□□□ -1.94
DOT6	YER088C	RPS13	P05756	151 aa	Known RBP	2.9	□□□□□ -1.95
DOT6	YER088C	RPC82	P32349	654 aa		2.9	□□□□□ -1.95
DOT6	YER088C	CDC11	P32458	415 aa		2.9	□□□□□ -1.95
DOT6	YER088C	DOM34	P33309	386 aa		2.9	□□□□□ -1.95
DOT6	YER088C	AIM3	P38266	947 aa	Known RBP	2.9	□□□□□ -1.95
DOT6	YER088C	GGA2	P38817	585 aa	Known RBP	2.9	□□□□□ -1.95
DOT6	YER088C	CHZ1	P40019	153 aa	Predicted RBP	2.9	□□□□□ -1.95
DOT6	YER088C	VPS62	P53285	467 aa		2.9	□□□□□ -1.95
DOT6	YER088C	HMI1	Q12039	706 aa		2.9	□□□□□ -1.95
DOT6	YER088C	SIN3	P22579	1536 aa		2.9	□□□□□ -1.95
DOT6	YER088C	REC104	P33323	182 aa		2.89	□□□□□ -1.95
DOT6	YER088C	HUL4	P40985	892 aa		2.89	□□□□□ -1.95
DOT6	YER088C	TY4A-J	P47023	414 aa		2.89	□□□□□ -1.95
DOT6	YER088C	PRP43	P53131	767 aa	Known RBP	2.89	□□□□□ -1.95
DOT6	YER088C	YGR012W	P53206	393 aa		2.89	□□□□□ -1.95
DOT6	YER088C	TPO2	P53283	614 aa		2.89	□□□□□ -1.95
DOT6	YER088C	ENV7	Q12003	364 aa		2.89	□□□□□ -1.95
DOT6	YER088C	BNI1	P41832	1953 aa		2.89	□□□□□ -1.95
DOT6	YER088C	LTE1	P07866	1435 aa		2.88	□□□□□ -1.95
DOT6	YER088C	FBP1	P09201	348 aa		2.88	□□□□□ -1.95
DOT6	YER088C	SRP101	P32916	621 aa		2.88	□□□□□ -1.95
DOT6	YER088C	ZRG8	P40021	1076 aa		2.88	□□□□□ -1.95
DOT6	YER088C	GYP8	P43570	497 aa		2.88	□□□□□ -1.95
DOT6	YER088C	MET12	P46151	657 aa		2.88	□□□□□ -1.95
DOT6	YER088C	CCM1	P48237	864 aa	Predicted RBP	2.88	□□□□□ -1.95
DOT6	YER088C	GCV2	P49095	1034 aa		2.88	□□□□□ -1.95
DOT6	YER088C	FPR4	Q06205	392 aa	Predicted RBP	2.88	□□□□□ -1.95
DOT6	YER088C	GAL11	P19659	1081 aa		2.88	□□□□□ -1.95
DOT6	YER088C	CDC20	P26309	610 aa		2.88	□□□□□ -1.95
DOT6	YER088C	NUP82	P40368	713 aa		2.88	□□□□□ -1.95
DOT6	YER088C	URM1	P40554	99 aa	Predicted RBP	2.88	□□□□□ -1.95
DOT6	YER088C	CHA4	P43634	648 aa		2.88	□□□□□ -1.95
DOT6	YER088C	RIM8	P53179	542 aa		2.88	□□□□□ -1.95
DOT6	YER088C	YDL124W	Q07551	312 aa	Known RBP	2.88	□□□□□ -1.95
DOT6	YER088C	TPO1	Q07824	586 aa		2.88	□□□□□ -1.95
DOT6	YER088C	YOR131C	Q12486	218 aa		2.88	□□□□□ -1.95
DOT6	YER088C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.87	□□□□□ -1.95	not detected
DOT6	YER088C	YGR283C	P53336	341 aa	Predicted RBP	2.87	□□□□□ -1.95
DOT6	YER088C	GPB1	Q08886	897 aa		2.87	□□□□□ -1.95
DOT6	YER088C	CDC25	P04821	1589 aa		2.87	□□□□□ -1.95
DOT6	YER088C	RPA190	P10964	1664 aa	Known RBP	2.87	□□□□□ -1.95
DOT6	YER088C	NOT3	P06102	836 aa	Known RBP	2.86	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms