RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 CCDC24Q8N4L8 307 aa22.5■■□□□ 1.19
PHGDH-227ENST00000641811 TSR2Q969E8 191 aaKnown RBP22.5■■□□□ 1.19
PHGDH-227ENST00000641811 ZNF652Q9Y2D9 606 aa22.5■■□□□ 1.19
PHGDH-227ENST00000641811 NRXN2Q9P2S2 1712 aa22.5■■□□□ 1.19
PHGDH-227ENST00000641811 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
PHGDH-227ENST00000641811 HDGFL1Q5TGJ6 251 aa22.49■■□□□ 1.19
PHGDH-227ENST00000641811 ZBTB3Q9H5J0 574 aa22.49■■□□□ 1.19
PHGDH-227ENST00000641811 MAP3K15Q6ZN16 1313 aa22.49■■□□□ 1.19
PHGDH-227ENST00000641811 GOLGB1Q14789 3259 aaKnown RBP22.48■■□□□ 1.19
PHGDH-227ENST00000641811 HOXB7P09629 217 aa22.48■■□□□ 1.19
PHGDH-227ENST00000641811 KCNA3P22001 575 aa22.48■■□□□ 1.19
PHGDH-227ENST00000641811 CHRNA5P30532 468 aa22.48■■□□□ 1.19
PHGDH-227ENST00000641811 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
PHGDH-227ENST00000641811 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
PHGDH-227ENST00000641811 C8orf58Q8NAV2 365 aa22.48■■□□□ 1.19
PHGDH-227ENST00000641811 CHPF2Q9P2E5 772 aa22.48■■□□□ 1.19
PHGDH-227ENST00000641811 PRR5LQ6MZQ0 368 aa22.47■■□□□ 1.19
PHGDH-227ENST00000641811 NIP7Q9Y221 180 aaKnown RBP eCLIP22.47■■□□□ 1.19
PHGDH-227ENST00000641811 ERVV-1B6SEH8 477 aa22.46■■□□□ 1.19
PHGDH-227ENST00000641811 DIEXFQ68CQ4 756 aaKnown RBP22.46■■□□□ 1.19
PHGDH-227ENST00000641811 DDX21Q9NR30 783 aaKnown RBP eCLIP22.46■■□□□ 1.19
PHGDH-227ENST00000641811 FAM177BA6PVY3 158 aa22.45■■□□□ 1.18
PHGDH-227ENST00000641811 CCER2I3L3R5 266 aa22.45■■□□□ 1.18
PHGDH-227ENST00000641811 RGL2O15211 777 aa22.45■■□□□ 1.18
PHGDH-227ENST00000641811 AIMP1Q12904 312 aaKnown RBP22.45■■□□□ 1.18
PHGDH-227ENST00000641811 COPS6Q7L5N1 327 aa22.45■■□□□ 1.18
PHGDH-227ENST00000641811 TSPYL6Q8N831 410 aa22.45■■□□□ 1.18
PHGDH-227ENST00000641811 XAGE3Q8WTP9 111 aa22.45■■□□□ 1.18
PHGDH-227ENST00000641811 IL16Q14005 1332 aa22.45■■□□□ 1.18
PHGDH-227ENST00000641811 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
PHGDH-227ENST00000641811 NBPF5PQ86XG9 351 aaPredicted RBP22.44■■□□□ 1.18
PHGDH-227ENST00000641811 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
PHGDH-227ENST00000641811 BCS1LQ9Y276 419 aa22.44■■□□□ 1.18
PHGDH-227ENST00000641811 UTRNP46939 3433 aa22.44■■□□□ 1.18
PHGDH-227ENST00000641811 NPHP1O15259 732 aa22.43■■□□□ 1.18
PHGDH-227ENST00000641811 YY1P25490 414 aa22.43■■□□□ 1.18
PHGDH-227ENST00000641811 WDR63Q8IWG1 891 aa22.43■■□□□ 1.18
PHGDH-227ENST00000641811 GPTP24298 496 aa22.42■■□□□ 1.18
PHGDH-227ENST00000641811 GIGYF2Q6Y7W6 1299 aaKnown RBP22.42■■□□□ 1.18
PHGDH-227ENST00000641811 SPINK5Q9NQ38 1064 aaPredicted RBP22.42■■□□□ 1.18
PHGDH-227ENST00000641811 PIM2Q9P1W9 311 aa22.42■■□□□ 1.18
PHGDH-227ENST00000641811 DBF4Q9UBU7 674 aaPredicted RBP22.42■■□□□ 1.18
PHGDH-227ENST00000641811 NUP98P52948 1817 aa22.42■■□□□ 1.18
PHGDH-227ENST00000641811 C2CD5Q86YS7 1000 aa22.41■■□□□ 1.18
PHGDH-227ENST00000641811 MIER1Q8N108 512 aa22.41■■□□□ 1.18
PHGDH-227ENST00000641811 BRIP1Q9BX63 1249 aa22.41■■□□□ 1.18
PHGDH-227ENST00000641811 ANKRD31Q8N7Z5 1873 aa22.41■■□□□ 1.18
PHGDH-227ENST00000641811 ATP10DQ9P241 1426 aa22.4■■□□□ 1.18
PHGDH-227ENST00000641811 BRCA1P38398 1863 aaKnown RBP22.39■■□□□ 1.18
PHGDH-227ENST00000641811 UBN2Q6ZU65 1347 aa22.39■■□□□ 1.18
PHGDH-227ENST00000641811 FANCIQ9NVI1 1328 aa22.39■■□□□ 1.18
PHGDH-227ENST00000641811 ST5P78524 1137 aa22.39■■□□□ 1.17
PHGDH-227ENST00000641811 ZNF34Q8IZ26 560 aa22.39■■□□□ 1.17
PHGDH-227ENST00000641811 H0YIN7 160 aa22.38■■□□□ 1.17
PHGDH-227ENST00000641811 DALRD3Q5D0E6 543 aaKnown RBP22.38■■□□□ 1.17
PHGDH-227ENST00000641811 TPTE2Q6XPS3 522 aa22.38■■□□□ 1.17
PHGDH-227ENST00000641811 HYPKQ9NX55 129 aa22.38■■□□□ 1.17
PHGDH-227ENST00000641811 TCERG1O14776 1098 aaKnown RBP22.37■■□□□ 1.17
PHGDH-227ENST00000641811 PDE6BP35913 854 aa22.37■■□□□ 1.17
PHGDH-227ENST00000641811 PHAXQ9H814 394 aaKnown RBP22.37■■□□□ 1.17
PHGDH-227ENST00000641811 TWISTNBQ3B726 338 aaPredicted RBP22.36■■□□□ 1.17
PHGDH-227ENST00000641811 SUSD4Q5VX71 490 aa22.36■■□□□ 1.17
PHGDH-227ENST00000641811 NUTM1Q86Y26 1132 aa22.36■■□□□ 1.17
PHGDH-227ENST00000641811 CHD4Q14839 1912 aa22.35■■□□□ 1.17
PHGDH-227ENST00000641811 ZNF521Q96K83 1311 aa22.35■■□□□ 1.17
PHGDH-227ENST00000641811 GTF2E1P29083 439 aaPredicted RBP22.35■■□□□ 1.17
PHGDH-227ENST00000641811 CCDC30Q5VVM6 783 aa22.35■■□□□ 1.17
PHGDH-227ENST00000641811 ZNF622Q969S3 477 aaKnown RBP eCLIP22.35■■□□□ 1.173e-9■■■□□ 17.8
PHGDH-227ENST00000641811 EXOSC9Q06265 439 aaKnown RBP22.34■■□□□ 1.17
PHGDH-227ENST00000641811 ERFEQ4G0M1 354 aa22.34■■□□□ 1.17
PHGDH-227ENST00000641811 ANKRD13DQ6ZTN6 518 aa22.34■■□□□ 1.17
PHGDH-227ENST00000641811 ARHGAP27Q6ZUM4 889 aa22.34■■□□□ 1.17
PHGDH-227ENST00000641811 COL11A2P13942 1736 aaPredicted RBP22.34■■□□□ 1.17
PHGDH-227ENST00000641811 DLEC1Q9Y238 1755 aa22.33■■□□□ 1.17
PHGDH-227ENST00000641811 GOLGA2Q08379 1002 aa22.33■■□□□ 1.17
PHGDH-227ENST00000641811 TCIRG1Q13488 830 aa22.33■■□□□ 1.17
PHGDH-227ENST00000641811 TTLL6Q8N841 843 aa22.33■■□□□ 1.17
PHGDH-227ENST00000641811 PLBD2Q8NHP8 589 aa22.33■■□□□ 1.17
PHGDH-227ENST00000641811 ZNF428Q96B54 188 aa22.33■■□□□ 1.17
PHGDH-227ENST00000641811 NYXQ9GZU5 481 aa22.33■■□□□ 1.17
PHGDH-227ENST00000641811 ABCC12Q96J65 1359 aa22.33■■□□□ 1.17
PHGDH-227ENST00000641811 NTSR2O95665 410 aa22.32■■□□□ 1.16
PHGDH-227ENST00000641811 SRGNP10124 158 aa22.31■■□□□ 1.16
PHGDH-227ENST00000641811 PARP10Q53GL7 1025 aa22.31■■□□□ 1.16
PHGDH-227ENST00000641811 HSP90AB3PQ58FF7 597 aa22.31■■□□□ 1.16
PHGDH-227ENST00000641811 MYH16Q9H6N6 1097 aa22.31■■□□□ 1.16
PHGDH-227ENST00000641811 PDZRN3Q9UPQ7 1066 aa22.31■■□□□ 1.16
PHGDH-227ENST00000641811 ARFGEF1Q9Y6D6 1849 aa22.3■■□□□ 1.16
PHGDH-227ENST00000641811 PPP1R42Q7Z4L9 355 aa22.3■■□□□ 1.16
PHGDH-227ENST00000641811 NLRP10Q86W26 655 aa22.3■■□□□ 1.16
PHGDH-227ENST00000641811 CHMP4AQ9BY43 222 aa22.3■■□□□ 1.16
PHGDH-227ENST00000641811 IBTKQ9P2D0 1353 aaPredicted RBP22.29■■□□□ 1.16
PHGDH-227ENST00000641811 KLRG2A4D1S0 409 aaPredicted RBP22.29■■□□□ 1.16
PHGDH-227ENST00000641811 VAMP4O75379 141 aa22.29■■□□□ 1.16
PHGDH-227ENST00000641811 UTP14AQ9BVJ6 771 aaKnown RBP22.29■■□□□ 1.16
PHGDH-227ENST00000641811 STK31Q9BXU1 1019 aa22.29■■□□□ 1.16
PHGDH-227ENST00000641811 ZNF219Q9P2Y4 722 aaPredicted RBP22.29■■□□□ 1.16
PHGDH-227ENST00000641811 TNRC6CQ9HCJ0 1690 aaKnown RBP22.29■■□□□ 1.16
PHGDH-227ENST00000641811 ANKRD36CQ5JPF3 1778 aa22.28■■□□□ 1.16
PHGDH-227ENST00000641811 ATP5J2-PTCD1G3V325 749 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms