RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 C21orf2O43822 256 aa22.21■■□□□ 1.15
PHGDH-213ENST00000641272 ST5P78524 1137 aa22.21■■□□□ 1.15
PHGDH-213ENST00000641272 NBPF26B4DH59 902 aa22.2■■□□□ 1.14
PHGDH-213ENST00000641272 NBPF10Q6P3W6 841 aaKnown RBP22.2■■□□□ 1.14
PHGDH-213ENST00000641272 NBPF15Q8N660 670 aa22.2■■□□□ 1.14
PHGDH-213ENST00000641272 THUMPD2Q9BTF0 503 aaKnown RBP22.19■■□□□ 1.14
PHGDH-213ENST00000641272 ZC3H4Q9UPT8 1303 aaKnown RBP22.19■■□□□ 1.14
PHGDH-213ENST00000641272 FAM177BA6PVY3 158 aa22.18■■□□□ 1.14
PHGDH-213ENST00000641272 NBPF5PQ86XG9 351 aaPredicted RBP22.18■■□□□ 1.14
PHGDH-213ENST00000641272 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
PHGDH-213ENST00000641272 NEFMP07197 916 aa22.17■■□□□ 1.14
PHGDH-213ENST00000641272 ZNF652Q9Y2D9 606 aa22.17■■□□□ 1.14
PHGDH-213ENST00000641272 TAF7Q15545 349 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-213ENST00000641272 PRPF40BQ6NWY9 871 aaKnown RBP22.16■■□□□ 1.14
PHGDH-213ENST00000641272 GLTPD2A6NH11 291 aa22.15■■□□□ 1.14
PHGDH-213ENST00000641272 NGEFQ8N5V2 710 aa22.15■■□□□ 1.14
PHGDH-213ENST00000641272 PDZRN3Q9UPQ7 1066 aa22.15■■□□□ 1.14
PHGDH-213ENST00000641272 NIP7Q9Y221 180 aaKnown RBP eCLIP22.15■■□□□ 1.14
PHGDH-213ENST00000641272 SRGNP10124 158 aa22.14■■□□□ 1.13
PHGDH-213ENST00000641272 FSTL1Q12841 308 aa22.14■■□□□ 1.13
PHGDH-213ENST00000641272 PLEKHF1Q96S99 279 aa22.14■■□□□ 1.13
PHGDH-213ENST00000641272 NUP98P52948 1817 aa22.14■■□□□ 1.13
PHGDH-213ENST00000641272 MAPK8IP3Q9UPT6 1336 aa22.13■■□□□ 1.13
PHGDH-213ENST00000641272 NFE2L2Q16236 605 aa22.13■■□□□ 1.13
PHGDH-213ENST00000641272 HLFQ16534 295 aa22.13■■□□□ 1.13
PHGDH-213ENST00000641272 STYK1Q6J9G0 422 aa22.13■■□□□ 1.13
PHGDH-213ENST00000641272 CNKSR1Q969H4 720 aa22.13■■□□□ 1.13
PHGDH-213ENST00000641272 MASTLQ96GX5 879 aa22.13■■□□□ 1.13
PHGDH-213ENST00000641272 TAOK3Q9H2K8 898 aa22.13■■□□□ 1.13
PHGDH-213ENST00000641272 ERFEQ4G0M1 354 aa22.12■■□□□ 1.13
PHGDH-213ENST00000641272 CLEC4GQ6UXB4 293 aa22.12■■□□□ 1.13
PHGDH-213ENST00000641272 ABCC12Q96J65 1359 aa22.12■■□□□ 1.13
PHGDH-213ENST00000641272 SMC1BQ8NDV3 1235 aa22.11■■□□□ 1.13
PHGDH-213ENST00000641272 DNAJC5GQ8N7S2 189 aa22.1■■□□□ 1.13
PHGDH-213ENST00000641272 LTBP3Q9NS15 1303 aa22.09■■□□□ 1.13
PHGDH-213ENST00000641272 VEGFAP15692 232 aaPredicted RBP22.09■■□□□ 1.13
PHGDH-213ENST00000641272 OLFM4Q6UX06 510 aa22.09■■□□□ 1.13
PHGDH-213ENST00000641272 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
PHGDH-213ENST00000641272 MYL6BP14649 208 aa22.08■■□□□ 1.13
PHGDH-213ENST00000641272 EIF4A1P60842 406 aaKnown RBP22.08■■□□□ 1.13
PHGDH-213ENST00000641272 PNISRQ8TF01 805 aaKnown RBP22.08■■□□□ 1.13
PHGDH-213ENST00000641272 NPR1P16066 1061 aa22.07■■□□□ 1.12
PHGDH-213ENST00000641272 TTLL7Q6ZT98 887 aa22.07■■□□□ 1.12
PHGDH-213ENST00000641272 POTECB2RU33 542 aa22.06■■□□□ 1.12
PHGDH-213ENST00000641272 CCDC93Q567U6 631 aa22.06■■□□□ 1.12
PHGDH-213ENST00000641272 IFFO2Q5TF58 517 aa22.06■■□□□ 1.12
PHGDH-213ENST00000641272 TPTE2Q6XPS3 522 aa22.06■■□□□ 1.12
PHGDH-213ENST00000641272 NUTM1Q86Y26 1132 aa22.06■■□□□ 1.12
PHGDH-213ENST00000641272 ZBTB3Q9H5J0 574 aa22.06■■□□□ 1.12
PHGDH-213ENST00000641272 GPTP24298 496 aa22.05■■□□□ 1.12
PHGDH-213ENST00000641272 GTF2E1P29083 439 aaPredicted RBP22.05■■□□□ 1.12
PHGDH-213ENST00000641272 SOGA3Q5TF21 947 aa22.05■■□□□ 1.12
PHGDH-213ENST00000641272 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
PHGDH-213ENST00000641272 KIF6Q6ZMV9 814 aa22.05■■□□□ 1.12
PHGDH-213ENST00000641272 KLRG1Q96E93 195 aa22.05■■□□□ 1.12
PHGDH-213ENST00000641272 MAP3K15Q6ZN16 1313 aa22.05■■□□□ 1.12
PHGDH-213ENST00000641272 DDNO94850 711 aaPredicted RBP22.04■■□□□ 1.12
PHGDH-213ENST00000641272 TSPYL4Q9UJ04 414 aa22.04■■□□□ 1.12
PHGDH-213ENST00000641272 C7orf43Q8WVR3 580 aa22.03■■□□□ 1.12
PHGDH-213ENST00000641272 ZNF277Q9NRM2 450 aaPredicted RBP22.03■■□□□ 1.12
PHGDH-213ENST00000641272 UBN2Q6ZU65 1347 aa22.03■■□□□ 1.12
PHGDH-213ENST00000641272 RGL2O15211 777 aa22.02■■□□□ 1.12
PHGDH-213ENST00000641272 POTEIP0CG38 1075 aa22.02■■□□□ 1.12
PHGDH-213ENST00000641272 POTEJP0CG39 1038 aa22.02■■□□□ 1.12
PHGDH-213ENST00000641272 KLRG2A4D1S0 409 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-213ENST00000641272 SLC51AQ86UW1 340 aa22.01■■□□□ 1.11
PHGDH-213ENST00000641272 PNNQ9H307 717 aaKnown RBP22.01■■□□□ 1.11
PHGDH-213ENST00000641272 ANKRD36CQ5JPF3 1778 aa22.01■■□□□ 1.11
PHGDH-213ENST00000641272 ZNF541Q9H0D2 1346 aa22.01■■□□□ 1.11
PHGDH-213ENST00000641272 RIPK4P57078 832 aa22■■□□□ 1.11
PHGDH-213ENST00000641272 FKBP4Q02790 459 aaKnown RBP eCLIP22■■□□□ 1.11
PHGDH-213ENST00000641272 CCDC146Q8IYE0 955 aa22■■□□□ 1.11
PHGDH-213ENST00000641272 ERVV-1B6SEH8 477 aa21.99■■□□□ 1.11
PHGDH-213ENST00000641272 ANXA1P04083 346 aa21.99■■□□□ 1.11
PHGDH-213ENST00000641272 DDX10Q13206 875 aaKnown RBP21.99■■□□□ 1.11
PHGDH-213ENST00000641272 NYXQ9GZU5 481 aa21.99■■□□□ 1.11
PHGDH-213ENST00000641272 SCN4AP35499 1836 aa21.99■■□□□ 1.11
PHGDH-213ENST00000641272 EIF2S2P20042 333 aaKnown RBP21.98■■□□□ 1.11
PHGDH-213ENST00000641272 RALBP1Q15311 655 aa21.98■■□□□ 1.11
PHGDH-213ENST00000641272 IBTKQ9P2D0 1353 aaPredicted RBP21.98■■□□□ 1.11
PHGDH-213ENST00000641272 SNED1Q8TER0 1413 aa21.97■■□□□ 1.11
PHGDH-213ENST00000641272 PROSER3Q2NL68 480 aa21.97■■□□□ 1.11
PHGDH-213ENST00000641272 NECTIN2Q92692 538 aa21.97■■□□□ 1.11
PHGDH-213ENST00000641272 COL4A5P29400 1685 aa21.97■■□□□ 1.11
PHGDH-213ENST00000641272 LAMB2P55268 1798 aa21.97■■□□□ 1.11
PHGDH-213ENST00000641272 RIC1Q4ADV7 1423 aa21.97■■□□□ 1.11
PHGDH-213ENST00000641272 TMPOP42166 694 aaKnown RBP21.96■■□□□ 1.11
PHGDH-213ENST00000641272 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
PHGDH-213ENST00000641272 CRY2Q49AN0 593 aa21.96■■□□□ 1.11
PHGDH-213ENST00000641272 SUSD4Q5VX71 490 aa21.96■■□□□ 1.11
PHGDH-213ENST00000641272 JMYQ8N9B5 988 aa21.96■■□□□ 1.11
PHGDH-213ENST00000641272 RPGRQ92834 1020 aaKnown RBP21.96■■□□□ 1.11
PHGDH-213ENST00000641272 MYBBP1AQ9BQG0 1328 aaKnown RBP21.96■■□□□ 1.11
PHGDH-213ENST00000641272 NTSR2O95665 410 aa21.95■■□□□ 1.1
PHGDH-213ENST00000641272 CHADLQ6NUI6 762 aa21.95■■□□□ 1.1
PHGDH-213ENST00000641272 C3orf67Q6ZVT6 689 aa21.95■■□□□ 1.1
PHGDH-213ENST00000641272 ERBB4Q15303 1308 aa21.95■■□□□ 1.1
PHGDH-213ENST00000641272 TCERG1O14776 1098 aaKnown RBP21.94■■□□□ 1.1
PHGDH-213ENST00000641272 ALDH1B1P30837 517 aa21.94■■□□□ 1.1
PHGDH-213ENST00000641272 IARSP41252 1262 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms