RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-280ENST00000640311 GRIN3BO60391 1043 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 ZNF853P0CG23 659 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 DPEP1P16444 411 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 YBX3P16989 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 YY1P25490 414 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 ZBTB3Q9H5J0 574 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 FAM177BA6PVY3 158 aa13.08□□□□□ -0.32
KCNMA1-280ENST00000640311 ANXA1P04083 346 aa13.08□□□□□ -0.32
KCNMA1-280ENST00000640311 AIMP1Q12904 312 aaKnown RBP13.08□□□□□ -0.32
KCNMA1-280ENST00000640311 DUSP27Q5VZP5 1158 aa13.08□□□□□ -0.32
KCNMA1-280ENST00000640311 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
KCNMA1-280ENST00000640311 BCS1LQ9Y276 419 aa13.08□□□□□ -0.32
KCNMA1-280ENST00000640311 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
KCNMA1-280ENST00000640311 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
KCNMA1-280ENST00000640311 HOXB7P09629 217 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 CHRNA5P30532 468 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 PDIA6Q15084 440 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 HLFQ16534 295 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 CNBD1Q8NA66 436 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 TSR2Q969E8 191 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 MAP3K15Q6ZN16 1313 aa13.07□□□□□ -0.32
KCNMA1-280ENST00000640311 ERVV-1B6SEH8 477 aa13.06□□□□□ -0.32
KCNMA1-280ENST00000640311 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
KCNMA1-280ENST00000640311 ST5P78524 1137 aa13.06□□□□□ -0.32
KCNMA1-280ENST00000640311 DIEXFQ68CQ4 756 aaKnown RBP13.06□□□□□ -0.32
KCNMA1-280ENST00000640311 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
KCNMA1-280ENST00000640311 PIM2Q9P1W9 311 aa13.06□□□□□ -0.32
KCNMA1-280ENST00000640311 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
KCNMA1-280ENST00000640311 H0YIN7 160 aa13.05□□□□□ -0.32
KCNMA1-280ENST00000640311 RGL2O15211 777 aa13.05□□□□□ -0.32
KCNMA1-280ENST00000640311 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
KCNMA1-280ENST00000640311 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
KCNMA1-280ENST00000640311 XAGE3Q8WTP9 111 aa13.05□□□□□ -0.32
KCNMA1-280ENST00000640311 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-280ENST00000640311 DDX21Q9NR30 783 aaKnown RBP eCLIP13.05□□□□□ -0.32
KCNMA1-280ENST00000640311 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-280ENST00000640311 KCNA3P22001 575 aa13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 GPTP24298 496 aa13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 PDE6BP35913 854 aa13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 BRIP1Q9BX63 1249 aa13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 BCORQ6W2J9 1755 aa13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 KIF13BQ9NQT8 1826 aa13.04□□□□□ -0.32
KCNMA1-280ENST00000640311 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 DSG3P32926 999 aa13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 DALRD3Q5D0E6 543 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 WDR63Q8IWG1 891 aa13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 IL16Q14005 1332 aa13.03□□□□□ -0.32
KCNMA1-280ENST00000640311 ARHGAP27Q6ZUM4 889 aa13.02□□□□□ -0.33
KCNMA1-280ENST00000640311 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
KCNMA1-280ENST00000640311 HYPKQ9NX55 129 aa13.02□□□□□ -0.33
KCNMA1-280ENST00000640311 AFDNP55196 1824 aaKnown RBP13.02□□□□□ -0.33
KCNMA1-280ENST00000640311 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
KCNMA1-280ENST00000640311 CCDC30Q5VVM6 783 aa13.01□□□□□ -0.33
KCNMA1-280ENST00000640311 TSPYL6Q8N831 410 aa13.01□□□□□ -0.33
KCNMA1-280ENST00000640311 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
KCNMA1-280ENST00000640311 NRXN2Q9P2S2 1712 aa13.01□□□□□ -0.33
KCNMA1-280ENST00000640311 KIAA1551Q9HCM1 1747 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 ATP10DQ9P241 1426 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 FANCIQ9NVI1 1328 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 TCERG1O14776 1098 aaKnown RBP13□□□□□ -0.33
KCNMA1-280ENST00000640311 GOLGA2Q08379 1002 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 HSP90AB3PQ58FF7 597 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 ANKRD13DQ6ZTN6 518 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 TTLL6Q8N841 843 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 STK31Q9BXU1 1019 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 MYH16Q9H6N6 1097 aa13□□□□□ -0.33
KCNMA1-280ENST00000640311 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
KCNMA1-280ENST00000640311 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
KCNMA1-280ENST00000640311 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
KCNMA1-280ENST00000640311 MIER1Q8N108 512 aa12.99□□□□□ -0.33
KCNMA1-280ENST00000640311 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
KCNMA1-280ENST00000640311 PHAXQ9H814 394 aaKnown RBP12.99□□□□□ -0.33
KCNMA1-280ENST00000640311 ERFEQ4G0M1 354 aa12.98□□□□□ -0.33
KCNMA1-280ENST00000640311 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
KCNMA1-280ENST00000640311 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
KCNMA1-280ENST00000640311 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
KCNMA1-280ENST00000640311 UTRNP46939 3433 aa12.97□□□□□ -0.33
KCNMA1-280ENST00000640311 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
KCNMA1-280ENST00000640311 SRGNP10124 158 aa12.97□□□□□ -0.33
KCNMA1-280ENST00000640311 EXOSC9Q06265 439 aaKnown RBP12.97□□□□□ -0.33
KCNMA1-280ENST00000640311 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
KCNMA1-280ENST00000640311 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
KCNMA1-280ENST00000640311 MASTLQ96GX5 879 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms