RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 GRM8O00222 908 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 PRIM1P49642 420 aaKnown RBP10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 IFNL2Q8IZJ0 200 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 CCAR2Q8N163 923 aaKnown RBP10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 GOLGA6L1Q8N7Z2 621 aa10.12□□□□□ -0.79
HNRNPU-219ENST00000639628 HOXB7P09629 217 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 USP48Q86UV5 1035 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 LINS1Q8NG48 757 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 STRN4Q9NRL3 753 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 ABCA6Q8N139 1617 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 IFIT1P09914 478 aaKnown RBP10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 CCDC112Q8NEF3 446 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 ARHGAP31Q2M1Z3 1444 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 SETBP1Q9Y6X0 1596 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 GSPT1P15170 499 aaKnown RBP10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 CCDC47Q96A33 483 aaKnown RBP10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 NOL10Q9BSC4 688 aaKnown RBP10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 ANTXR1Q9H6X2 564 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 RTL1A6NKG5 1358 aa10.11□□□□□ -0.79
HNRNPU-219ENST00000639628 CTAGE5O15320 804 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 ADCY5O95622 1261 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 GPS2Q13227 327 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 KRT28Q7Z3Y7 464 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 RBM8AQ9Y5S9 174 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 F13A1P00488 732 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 TRIM22Q8IYM9 498 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 NACAP1Q9BZK3 213 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 EPB41L2O43491 1005 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 ZNF771Q7L3S4 317 aaPredicted RBP10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 NEK1Q96PY6 1258 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 IP6K1Q92551 441 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 PHAXQ9H814 394 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 CNPY2Q9Y2B0 182 aa10.1□□□□□ -0.79
HNRNPU-219ENST00000639628 TMEM2Q9UHN6 1383 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 IPO7O95373 1038 aaKnown RBP10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 CAVIN2O95810 425 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 ZNF853P0CG23 659 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 HCLS1P14317 486 aaPredicted RBP10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 UBE3BQ7Z3V4 1068 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 ZKSCAN5Q9Y2L8 839 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 ADGRB3O60242 1522 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 AK2P54819 239 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 TMX4Q9H1E5 349 aaPredicted RBP10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 ANO10Q9NW15 660 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 USP19O94966 1318 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 ZNF445P59923 1031 aa10.09□□□□□ -0.79
HNRNPU-219ENST00000639628 MARCH6O60337 910 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 VPS53Q5VIR6 699 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 CEP152O94986 1710 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 GLI2P10070 1586 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 CKAP2LQ8IYA6 745 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 PDILTQ8N807 584 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 ZSCAN16Q9H4T2 348 aaPredicted RBP10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 RAD50Q92878 1312 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 CCDC69A6NI79 296 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 SMTNL1A8MU46 457 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 SERPINC1P01008 464 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 RRP12Q5JTH9 1297 aaKnown RBP10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 TFIP11Q9UBB9 837 aaKnown RBP10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 LMTK2Q8IWU2 1503 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 CDK12Q9NYV4 1490 aaPredicted RBP10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 PNMA6EA0A0J9YXQ4 647 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 CBFA2T2O43439 604 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 TEX35Q5T0J7 233 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 FILIP1Q7Z7B0 1213 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 PDCL3Q9H2J4 239 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 RRAGDQ9NQL2 400 aaPredicted RBP10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 DACH1Q9UI36 760 aa10.08□□□□□ -0.8
HNRNPU-219ENST00000639628 PTCD1O75127 700 aaKnown RBP10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 KDM4AO75164 1064 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 STARD3NLO95772 234 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 KCNA6P17658 529 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 NECAB1Q8N987 351 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 ATP2B1P20020 1258 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 METTL24Q5JXM2 366 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 C8orf76Q96K31 380 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 MPHOSPH8Q99549 860 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 PA2G4Q9UQ80 394 aaKnown RBP10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 QRICH2Q9H0J4 1663 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 GIMAP6Q6P9H5 292 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 COPS6Q7L5N1 327 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 WASF1Q92558 559 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 GNL3LQ9NVN8 582 aaKnown RBP10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 CWC25Q9NXE8 425 aaPredicted RBP10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
HNRNPU-219ENST00000639628 GOLIM4O00461 696 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 HOMEZQ8IX15 550 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 SGSM2O43147 1006 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 IDH1O75874 414 aaKnown RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 NMIQ13287 307 aaPredicted RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 LMBRD1Q9NUN5 540 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 SSH2Q76I76 1423 aa10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 A0A0U1RQG5 324 aaPredicted RBP10.06□□□□□ -0.8
HNRNPU-219ENST00000639628 ATP5J2-PTCD1G3V325 749 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms