RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 SYCE3A1L190 88 aa22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 CEP57Q86XR8 500 aa22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 DZIP1Q86YF9 867 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 STRN4Q9NRL3 753 aa22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 TMOD2Q9NZR1 351 aa22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 CTAGE9A4FU28 777 aa22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 PSMD1Q99460 953 aa22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 LIG1P18858 919 aa22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 CFAP157Q5JU67 520 aa22.16■■□□□ 1.14
CACNA1A-257ENST00000638009 ARFGAP2Q8N6H7 521 aa22.15■■□□□ 1.14
CACNA1A-257ENST00000638009 AFAP1L2Q8N4X5 818 aa22.15■■□□□ 1.14
CACNA1A-257ENST00000638009 SYNCQ9H7C4 482 aa22.15■■□□□ 1.14
CACNA1A-257ENST00000638009 SAMD15Q9P1V8 674 aa22.15■■□□□ 1.14
CACNA1A-257ENST00000638009 CCDC129Q6ZRS4 1044 aa22.15■■□□□ 1.14
CACNA1A-257ENST00000638009 CCDC82Q8N4S0 544 aa22.15■■□□□ 1.14
CACNA1A-257ENST00000638009 RFC1P35251 1148 aaPredicted RBP22.14■■□□□ 1.14
CACNA1A-257ENST00000638009 PRR16Q569H4 304 aa22.14■■□□□ 1.14
CACNA1A-257ENST00000638009 SH3BP5O60239 455 aa22.14■■□□□ 1.14
CACNA1A-257ENST00000638009 CCDC144CPQ8IYA2 1237 aa22.14■■□□□ 1.14
CACNA1A-257ENST00000638009 CALML4Q96GE6 196 aa22.14■■□□□ 1.14
CACNA1A-257ENST00000638009 C16orf45Q96MC5 204 aaPredicted RBP22.14■■□□□ 1.13
CACNA1A-257ENST00000638009 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
CACNA1A-257ENST00000638009 TSNAXIP1Q2TAA8 658 aa22.13■■□□□ 1.13
CACNA1A-257ENST00000638009 MCM4P33991 863 aa22.13■■□□□ 1.13
CACNA1A-257ENST00000638009 STK3Q13188 491 aa22.13■■□□□ 1.13
CACNA1A-257ENST00000638009 BAG4O95429 457 aaKnown RBP22.13■■□□□ 1.13
CACNA1A-257ENST00000638009 UTP14AQ9BVJ6 771 aaKnown RBP22.12■■□□□ 1.13
CACNA1A-257ENST00000638009 VCX3AQ9NNX9 186 aa22.12■■□□□ 1.13
CACNA1A-257ENST00000638009 RBM5P52756 815 aaKnown RBP eCLIP22.12■■□□□ 1.13
CACNA1A-257ENST00000638009 KLHL10Q6JEL2 608 aa22.12■■□□□ 1.13
CACNA1A-257ENST00000638009 LMBR1Q8WVP7 490 aa22.12■■□□□ 1.13
CACNA1A-257ENST00000638009 TCP11L1Q9NUJ3 509 aa22.12■■□□□ 1.13
CACNA1A-257ENST00000638009 CTAGE6Q86UF2 777 aa22.12■■□□□ 1.13
CACNA1A-257ENST00000638009 ARHGAP24Q8N264 748 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 TRPC3Q13507 836 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 ZNF428Q96B54 188 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 IRX4P78413 519 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 TAOK1Q7L7X3 1001 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 PNISRQ8TF01 805 aaKnown RBP22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 ATF3P18847 181 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 KLHL34Q8N239 644 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 RMND1Q9NWS8 449 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 PLEKHH2Q8IVE3 1493 aa22.11■■□□□ 1.13
CACNA1A-257ENST00000638009 DDX19AQ9NUU7 478 aaKnown RBP22.1■■□□□ 1.13
CACNA1A-257ENST00000638009 MTIF2P46199 727 aaKnown RBP22.1■■□□□ 1.13
CACNA1A-257ENST00000638009 TBC1D31Q96DN5 1066 aa22.1■■□□□ 1.13
CACNA1A-257ENST00000638009 CACYBPQ9HB71 228 aaKnown RBP22.1■■□□□ 1.13
CACNA1A-257ENST00000638009 HAUS2Q9NVX0 235 aa22.1■■□□□ 1.13
CACNA1A-257ENST00000638009 RPGRIP1LQ68CZ1 1315 aa22.1■■□□□ 1.13
CACNA1A-257ENST00000638009 MSANTD4Q8NCY6 345 aa22.1■■□□□ 1.13
CACNA1A-257ENST00000638009 DHX57Q6P158 1386 aaKnown RBP22.1■■□□□ 1.13
CACNA1A-257ENST00000638009 SLF2Q8IX21 1173 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 CCDC63Q8NA47 563 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 HVCN1Q96D96 273 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 KDM4AO75164 1064 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 CNNM3Q8NE01 707 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 PANK1Q8TE04 598 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 NAA25Q14CX7 972 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 CPLX4Q7Z7G2 160 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 BCAP29Q9UHQ4 241 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 CYLC1P35663 651 aaPredicted RBP22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 CCDC114Q96M63 670 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 DNAJC8O75937 253 aaPredicted RBP22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 GPRASP1Q5JY77 1395 aa22.09■■□□□ 1.13
CACNA1A-257ENST00000638009 C8orf76Q96K31 380 aa22.08■■□□□ 1.13
CACNA1A-257ENST00000638009 FYCO1Q9BQS8 1478 aa22.08■■□□□ 1.13
CACNA1A-257ENST00000638009 MYH9P35579 1960 aaKnown RBP22.08■■□□□ 1.12
CACNA1A-257ENST00000638009 CTCFLQ8NI51 663 aaPredicted RBP22.08■■□□□ 1.12
CACNA1A-257ENST00000638009 ATRIPQ8WXE1 791 aa22.08■■□□□ 1.12
CACNA1A-257ENST00000638009 MTUS1Q9ULD2 1270 aa22.08■■□□□ 1.12
CACNA1A-257ENST00000638009 STX6O43752 255 aa22.08■■□□□ 1.12
CACNA1A-257ENST00000638009 TSGA10Q9BZW7 698 aa22.08■■□□□ 1.12
CACNA1A-257ENST00000638009 PLEKHO1Q53GL0 409 aaPredicted RBP22.07■■□□□ 1.12
CACNA1A-257ENST00000638009 IQCA1Q86XH1 822 aa22.07■■□□□ 1.12
CACNA1A-257ENST00000638009 SYCP3Q8IZU3 236 aa22.07■■□□□ 1.12
CACNA1A-257ENST00000638009 VPS52Q8N1B4 723 aa22.07■■□□□ 1.12
CACNA1A-257ENST00000638009 PRDM10Q9NQV6 1147 aa22.07■■□□□ 1.12
CACNA1A-257ENST00000638009 UBA5Q9GZZ9 404 aa22.07■■□□□ 1.12
CACNA1A-257ENST00000638009 RSPH3Q86UC2 560 aa22.07■■□□□ 1.12
CACNA1A-257ENST00000638009 USP5P45974 858 aa22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 FKBP4Q02790 459 aaKnown RBP eCLIP22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 ZSCAN29Q8IWY8 852 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 CCDC96Q2M329 555 aa22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 HDAC9Q9UKV0 1011 aa22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 TACC3Q9Y6A5 838 aa22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 GOLGA1Q92805 767 aa22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 AIDAQ96BJ3 306 aa22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 SPAG5Q96R06 1193 aa22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 TRIM35Q9UPQ4 493 aa22.06■■□□□ 1.12
CACNA1A-257ENST00000638009 JAKMIP1Q96N16 626 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-257ENST00000638009 CAPN2P17655 700 aa22.05■■□□□ 1.12
CACNA1A-257ENST00000638009 CCT6BQ92526 530 aa22.05■■□□□ 1.12
CACNA1A-257ENST00000638009 RNF41Q9H4P4 317 aaPredicted RBP22.05■■□□□ 1.12
CACNA1A-257ENST00000638009 LRP2BPQ9P2M1 347 aa22.05■■□□□ 1.12
CACNA1A-257ENST00000638009 TSPYL2Q9H2G4 693 aaPredicted RBP22.05■■□□□ 1.12
CACNA1A-257ENST00000638009 MTRF1LQ9UGC7 380 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-257ENST00000638009 MICALL1Q8N3F8 863 aa22.05■■□□□ 1.12
CACNA1A-257ENST00000638009 ZNF365Q70YC5 407 aa22.04■■□□□ 1.12
CACNA1A-257ENST00000638009 POTEDQ86YR6 584 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms