RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 CLASRPQ8N2M8 674 aaKnown RBP22.54■■□□□ 1.2
CTSD-212ENST00000637815 SSFA2P28290 1259 aa22.53■■□□□ 1.2
CTSD-212ENST00000637815 XAGE3Q8WTP9 111 aa22.53■■□□□ 1.2
CTSD-212ENST00000637815 FMNL2Q96PY5 1086 aa22.53■■□□□ 1.2
CTSD-212ENST00000637815 SOS2Q07890 1332 aaPredicted RBP22.53■■□□□ 1.2
CTSD-212ENST00000637815 NEURL1BA8MQ27 555 aa22.53■■□□□ 1.2
CTSD-212ENST00000637815 GLRX3O76003 335 aaKnown RBP22.53■■□□□ 1.2
CTSD-212ENST00000637815 CYP2E1P05181 493 aaPredicted RBP22.53■■□□□ 1.2
CTSD-212ENST00000637815 IL25Q9H293 177 aa22.53■■□□□ 1.2
CTSD-212ENST00000637815 BICC1Q9H694 974 aaKnown RBP22.53■■□□□ 1.2
CTSD-212ENST00000637815 PALD1Q9ULE6 856 aa22.53■■□□□ 1.2
CTSD-212ENST00000637815 WDR17Q8IZU2 1322 aa22.53■■□□□ 1.2
CTSD-212ENST00000637815 MYL6BP14649 208 aa22.52■■□□□ 1.2
CTSD-212ENST00000637815 MCM2P49736 904 aa22.52■■□□□ 1.2
CTSD-212ENST00000637815 NUCB2P80303 420 aa22.52■■□□□ 1.2
CTSD-212ENST00000637815 NEXNQ0ZGT2 675 aa22.52■■□□□ 1.2
CTSD-212ENST00000637815 METTL22Q9BUU2 404 aaPredicted RBP22.52■■□□□ 1.2
CTSD-212ENST00000637815 NEK4P51957 841 aa22.52■■□□□ 1.19
CTSD-212ENST00000637815 COPS6Q7L5N1 327 aa22.52■■□□□ 1.19
CTSD-212ENST00000637815 PA2G4Q9UQ80 394 aaKnown RBP22.52■■□□□ 1.19
CTSD-212ENST00000637815 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
CTSD-212ENST00000637815 SGSM2O43147 1006 aa22.51■■□□□ 1.19
CTSD-212ENST00000637815 L1TD1Q5T7N2 865 aaKnown RBP22.51■■□□□ 1.19
CTSD-212ENST00000637815 IL27Q8NEV9 243 aa22.51■■□□□ 1.19
CTSD-212ENST00000637815 USP16Q9Y5T5 823 aa22.51■■□□□ 1.19
CTSD-212ENST00000637815 PAPPAQ13219 1627 aa22.51■■□□□ 1.19
CTSD-212ENST00000637815 COL5A2P05997 1499 aaPredicted RBP22.51■■□□□ 1.19
CTSD-212ENST00000637815 FSD2A1L4K1 749 aa22.5■■□□□ 1.19
CTSD-212ENST00000637815 MAP4K4O95819 1239 aaPredicted RBP22.5■■□□□ 1.19
CTSD-212ENST00000637815 CABP4P57796 275 aa22.5■■□□□ 1.19
CTSD-212ENST00000637815 BRPF3Q9ULD4 1205 aa22.5■■□□□ 1.19
CTSD-212ENST00000637815 GCKRQ14397 625 aa22.5■■□□□ 1.19
CTSD-212ENST00000637815 SKOR2Q2VWA4 1001 aaPredicted RBP22.5■■□□□ 1.19
CTSD-212ENST00000637815 HSPA4P34932 840 aa22.49■■□□□ 1.19
CTSD-212ENST00000637815 ECHDC1Q9NTX5 307 aa22.49■■□□□ 1.19
CTSD-212ENST00000637815 RAD50Q92878 1312 aa22.49■■□□□ 1.19
CTSD-212ENST00000637815 ANKRD13DQ6ZTN6 518 aa22.48■■□□□ 1.19
CTSD-212ENST00000637815 GPATCH3Q96I76 525 aa22.48■■□□□ 1.19
CTSD-212ENST00000637815 PRDM11Q9NQV5 511 aa22.48■■□□□ 1.19
CTSD-212ENST00000637815 PCDH11XQ9BZA7 1347 aa22.48■■□□□ 1.19
CTSD-212ENST00000637815 PCDH11YQ9BZA8 1340 aa22.48■■□□□ 1.19
CTSD-212ENST00000637815 COL15A1P39059 1388 aa22.48■■□□□ 1.19
CTSD-212ENST00000637815 GZF1Q9H116 711 aaPredicted RBP22.48■■□□□ 1.19
CTSD-212ENST00000637815 BAG4O95429 457 aaKnown RBP22.47■■□□□ 1.19
CTSD-212ENST00000637815 ZGPATQ8N5A5 531 aaKnown RBP22.47■■□□□ 1.19
CTSD-212ENST00000637815 TMX3Q96JJ7 454 aa22.47■■□□□ 1.19
CTSD-212ENST00000637815 MYD88Q99836 296 aa22.47■■□□□ 1.19
CTSD-212ENST00000637815 SLAIN2Q9P270 581 aa22.47■■□□□ 1.19
CTSD-212ENST00000637815 SASH1O94885 1247 aa22.47■■□□□ 1.19
CTSD-212ENST00000637815 IFIT2P09913 472 aaKnown RBP22.47■■□□□ 1.19
CTSD-212ENST00000637815 NHSL1Q5SYE7 1610 aa22.46■■□□□ 1.19
CTSD-212ENST00000637815 NUP188Q5SRE5 1749 aa22.46■■□□□ 1.19
CTSD-212ENST00000637815 GOLGA6L22H0YM25 854 aa22.45■■□□□ 1.18
CTSD-212ENST00000637815 G3BP1Q13283 466 aaKnown RBP eCLIP22.45■■□□□ 1.18
CTSD-212ENST00000637815 CUL4AQ13619 759 aa22.45■■□□□ 1.18
CTSD-212ENST00000637815 ZCRB1Q8TBF4 217 aaKnown RBP22.45■■□□□ 1.18
CTSD-212ENST00000637815 LSG1Q9H089 658 aaKnown RBP22.45■■□□□ 1.18
CTSD-212ENST00000637815 ERBB4Q15303 1308 aa22.45■■□□□ 1.18
CTSD-212ENST00000637815 GOLGA6L3A6NEY3 463 aa22.45■■□□□ 1.18
CTSD-212ENST00000637815 AACSQ86V21 672 aa22.45■■□□□ 1.18
CTSD-212ENST00000637815 TOM1L2Q6ZVM7 507 aa22.44■■□□□ 1.18
CTSD-212ENST00000637815 KCPQ6ZWJ8 1503 aa22.44■■□□□ 1.18
CTSD-212ENST00000637815 ERVV-2B6SEH9 535 aa22.43■■□□□ 1.18
CTSD-212ENST00000637815 PKP1Q13835 747 aa22.43■■□□□ 1.18
CTSD-212ENST00000637815 NKX1-1Q15270 411 aaPredicted RBP22.43■■□□□ 1.18
CTSD-212ENST00000637815 ZNF335Q9H4Z2 1342 aaPredicted RBP22.42■■□□□ 1.18
CTSD-212ENST00000637815 EPHA10Q5JZY3 1008 aa22.42■■□□□ 1.18
CTSD-212ENST00000637815 RUFY2Q8WXA3 655 aa22.42■■□□□ 1.18
CTSD-212ENST00000637815 EAF2Q96CJ1 260 aaPredicted RBP22.42■■□□□ 1.18
CTSD-212ENST00000637815 EVI5LQ96CN4 794 aa22.42■■□□□ 1.18
CTSD-212ENST00000637815 INTS4Q96HW7 963 aaKnown RBP22.42■■□□□ 1.18
CTSD-212ENST00000637815 CARD10Q9BWT7 1032 aa22.42■■□□□ 1.18
CTSD-212ENST00000637815 ISY1Q9ULR0 285 aaKnown RBP22.42■■□□□ 1.18
CTSD-212ENST00000637815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.42■■□□□ 1.18
CTSD-212ENST00000637815 PIP4K2AP48426 406 aaPredicted RBP22.41■■□□□ 1.18
CTSD-212ENST00000637815 CWC27Q6UX04 472 aaKnown RBP22.41■■□□□ 1.18
CTSD-212ENST00000637815 PLBD2Q8NHP8 589 aa22.41■■□□□ 1.18
CTSD-212ENST00000637815 RABL6Q3YEC7 729 aaPredicted RBP22.41■■□□□ 1.18
CTSD-212ENST00000637815 DIAPH3Q9NSV4 1193 aa22.41■■□□□ 1.18
CTSD-212ENST00000637815 ZDHHC9Q9Y397 364 aa22.41■■□□□ 1.18
CTSD-212ENST00000637815 COPRSQ9NQ92 184 aa22.4■■□□□ 1.18
CTSD-212ENST00000637815 KIAA1211Q6ZU35 1233 aa22.4■■□□□ 1.18
CTSD-212ENST00000637815 UPF3BQ9BZI7 483 aaKnown RBP22.4■■□□□ 1.18
CTSD-212ENST00000637815 SNX14Q9Y5W7 946 aa22.4■■□□□ 1.18
CTSD-212ENST00000637815 TJP1Q07157 1748 aa22.39■■□□□ 1.18
CTSD-212ENST00000637815 IL2RBP14784 551 aa22.39■■□□□ 1.17
CTSD-212ENST00000637815 TOGARAM1Q9Y4F4 1720 aa22.39■■□□□ 1.17
CTSD-212ENST00000637815 RFX5P48382 616 aaPredicted RBP22.38■■□□□ 1.17
CTSD-212ENST00000637815 SIL1Q9H173 461 aa22.38■■□□□ 1.17
CTSD-212ENST00000637815 TNS2Q63HR2 1409 aa22.38■■□□□ 1.17
CTSD-212ENST00000637815 NBPF26B4DH59 902 aa22.38■■□□□ 1.17
CTSD-212ENST00000637815 XRCC6P12956 609 aaKnown RBP eCLIP22.38■■□□□ 1.17
CTSD-212ENST00000637815 KLHL40Q2TBA0 621 aa22.38■■□□□ 1.17
CTSD-212ENST00000637815 NBPF14Q5TI25 921 aa22.38■■□□□ 1.17
CTSD-212ENST00000637815 NBPF10Q6P3W6 841 aaKnown RBP22.38■■□□□ 1.17
CTSD-212ENST00000637815 NBPF15Q8N660 670 aa22.38■■□□□ 1.17
CTSD-212ENST00000637815 CASP7P55210 303 aa22.37■■□□□ 1.17
CTSD-212ENST00000637815 KLHDC4Q8TBB5 520 aa22.37■■□□□ 1.17
CTSD-212ENST00000637815 UBE3BQ7Z3V4 1068 aa22.36■■□□□ 1.17
CTSD-212ENST00000637815 CCDC8Q9H0W5 538 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms