RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 NBPF5PQ86XG9 351 aaPredicted RBP23.88■■□□□ 1.41
CLN6-210ENST00000635747 LAMB4A4D0S4 1761 aa23.88■■□□□ 1.41
CLN6-210ENST00000635747 TPTE2Q6XPS3 522 aa23.87■■□□□ 1.41
CLN6-210ENST00000635747 GPBP1L1Q9HC44 474 aaPredicted RBP23.87■■□□□ 1.41
CLN6-210ENST00000635747 NIP7Q9Y221 180 aaKnown RBP eCLIP23.87■■□□□ 1.41
CLN6-210ENST00000635747 BCORQ6W2J9 1755 aa23.86■■□□□ 1.41
CLN6-210ENST00000635747 MYL6BP14649 208 aa23.86■■□□□ 1.41
CLN6-210ENST00000635747 NGEFQ8N5V2 710 aa23.86■■□□□ 1.41
CLN6-210ENST00000635747 MAP3K15Q6ZN16 1313 aa23.85■■□□□ 1.41
CLN6-210ENST00000635747 ARFGEF1Q9Y6D6 1849 aa23.85■■□□□ 1.41
CLN6-210ENST00000635747 LAS1LQ9Y4W2 734 aaKnown RBP23.85■■□□□ 1.41
CLN6-210ENST00000635747 APAF1O14727 1248 aa23.84■■□□□ 1.41
CLN6-210ENST00000635747 ANP32CO43423 234 aa23.84■■□□□ 1.41
CLN6-210ENST00000635747 EIF2S2P20042 333 aaKnown RBP23.84■■□□□ 1.41
CLN6-210ENST00000635747 CALD1Q05682 793 aaKnown RBP23.84■■□□□ 1.41
CLN6-210ENST00000635747 HLFQ16534 295 aa23.84■■□□□ 1.41
CLN6-210ENST00000635747 ZNF622Q969S3 477 aaKnown RBP eCLIP23.84■■□□□ 1.41
CLN6-210ENST00000635747 CFAP44Q96MT7 982 aa23.83■■□□□ 1.41
CLN6-210ENST00000635747 C1QTNF8P60827 252 aa23.82■■□□□ 1.4
CLN6-210ENST00000635747 TTLL7Q6ZT98 887 aa23.82■■□□□ 1.4
CLN6-210ENST00000635747 CCDC24Q8N4L8 307 aa23.82■■□□□ 1.4
CLN6-210ENST00000635747 NYXQ9GZU5 481 aa23.82■■□□□ 1.4
CLN6-210ENST00000635747 GTF2E1P29083 439 aaPredicted RBP23.81■■□□□ 1.4
CLN6-210ENST00000635747 C9orf131Q5VYM1 1079 aa23.81■■□□□ 1.4
CLN6-210ENST00000635747 STYK1Q6J9G0 422 aa23.81■■□□□ 1.4
CLN6-210ENST00000635747 CNKSR1Q969H4 720 aa23.81■■□□□ 1.4
CLN6-210ENST00000635747 HOXB7P09629 217 aa23.8■■□□□ 1.4
CLN6-210ENST00000635747 ZNF526Q8TF50 670 aaPredicted RBP23.8■■□□□ 1.4
CLN6-210ENST00000635747 MASTLQ96GX5 879 aa23.8■■□□□ 1.4
CLN6-210ENST00000635747 SRGNP10124 158 aa23.79■■□□□ 1.4
CLN6-210ENST00000635747 PDIA6Q15084 440 aa23.79■■□□□ 1.4
CLN6-210ENST00000635747 GIGYF2Q6Y7W6 1299 aaKnown RBP23.78■■□□□ 1.4
CLN6-210ENST00000635747 ZBTB3Q9H5J0 574 aa23.78■■□□□ 1.4
CLN6-210ENST00000635747 RNF181Q9P0P0 153 aa23.78■■□□□ 1.4
CLN6-210ENST00000635747 DLEC1Q9Y238 1755 aa23.78■■□□□ 1.4
CLN6-210ENST00000635747 KLRG2A4D1S0 409 aaPredicted RBP23.77■■□□□ 1.4
CLN6-210ENST00000635747 GNAI1P63096 354 aa23.77■■□□□ 1.4
CLN6-210ENST00000635747 LRP10Q7Z4F1 713 aa23.77■■□□□ 1.4
CLN6-210ENST00000635747 DDX21Q9NR30 783 aaKnown RBP eCLIP23.77■■□□□ 1.4
CLN6-210ENST00000635747 IFT57Q9NWB7 429 aa23.77■■□□□ 1.4
CLN6-210ENST00000635747 FAM177BA6PVY3 158 aa23.76■■□□□ 1.39
CLN6-210ENST00000635747 NPR1P16066 1061 aa23.76■■□□□ 1.39
CLN6-210ENST00000635747 SOGA3Q5TF21 947 aa23.76■■□□□ 1.39
CLN6-210ENST00000635747 ANKRD31Q8N7Z5 1873 aa23.76■■□□□ 1.39
CLN6-210ENST00000635747 ZNF853P0CG23 659 aa23.75■■□□□ 1.39
CLN6-210ENST00000635747 LMNB1P20700 586 aa23.75■■□□□ 1.39
CLN6-210ENST00000635747 CCDC184Q52MB2 194 aa23.75■■□□□ 1.39
CLN6-210ENST00000635747 MRS2Q9HD23 443 aa23.75■■□□□ 1.39
CLN6-210ENST00000635747 ZC3H4Q9UPT8 1303 aaKnown RBP23.75■■□□□ 1.39
CLN6-210ENST00000635747 PARP10Q53GL7 1025 aa23.74■■□□□ 1.39
CLN6-210ENST00000635747 HDGFL1Q5TGJ6 251 aa23.74■■□□□ 1.39
CLN6-210ENST00000635747 PPP1R42Q7Z4L9 355 aa23.74■■□□□ 1.39
CLN6-210ENST00000635747 ZNF34Q8IZ26 560 aa23.74■■□□□ 1.39
CLN6-210ENST00000635747 NECTIN2Q92692 538 aa23.74■■□□□ 1.39
CLN6-210ENST00000635747 MBIPQ9NS73 344 aa23.74■■□□□ 1.39
CLN6-210ENST00000635747 IBTKQ9P2D0 1353 aaPredicted RBP23.74■■□□□ 1.39
CLN6-210ENST00000635747 C21orf2O43822 256 aa23.73■■□□□ 1.39
CLN6-210ENST00000635747 KRT24Q2M2I5 525 aa23.73■■□□□ 1.39
CLN6-210ENST00000635747 PROSER3Q2NL68 480 aa23.73■■□□□ 1.39
CLN6-210ENST00000635747 HSP90AB3PQ58FF7 597 aa23.73■■□□□ 1.39
CLN6-210ENST00000635747 PRPF40BQ6NWY9 871 aaKnown RBP23.73■■□□□ 1.39
CLN6-210ENST00000635747 COPS6Q7L5N1 327 aa23.73■■□□□ 1.39
CLN6-210ENST00000635747 CHMP4AQ9BY43 222 aa23.73■■□□□ 1.39
CLN6-210ENST00000635747 DBF4Q9UBU7 674 aaPredicted RBP23.73■■□□□ 1.39
CLN6-210ENST00000635747 ANXA1P04083 346 aa23.72■■□□□ 1.39
CLN6-210ENST00000635747 GPTP24298 496 aa23.72■■□□□ 1.39
CLN6-210ENST00000635747 RASSF7Q02833 373 aa23.72■■□□□ 1.39
CLN6-210ENST00000635747 DUSP27Q5VZP5 1158 aa23.72■■□□□ 1.39
CLN6-210ENST00000635747 KDM2BQ8NHM5 1336 aa23.71■■□□□ 1.39
CLN6-210ENST00000635747 ALDH1B1P30837 517 aa23.71■■□□□ 1.39
CLN6-210ENST00000635747 NCBP3Q53F19 620 aaKnown RBP23.71■■□□□ 1.39
CLN6-210ENST00000635747 XAGE3Q8WTP9 111 aa23.71■■□□□ 1.39
CLN6-210ENST00000635747 UBN2Q6ZU65 1347 aa23.7■■□□□ 1.38
CLN6-210ENST00000635747 AIMP1Q12904 312 aaKnown RBP23.7■■□□□ 1.38
CLN6-210ENST00000635747 CCDC27Q2M243 656 aa23.7■■□□□ 1.38
CLN6-210ENST00000635747 SUSD4Q5VX71 490 aa23.7■■□□□ 1.38
CLN6-210ENST00000635747 CHPF2Q9P2E5 772 aa23.7■■□□□ 1.38
CLN6-210ENST00000635747 ZNF219Q9P2Y4 722 aaPredicted RBP23.7■■□□□ 1.38
CLN6-210ENST00000635747 NUP98P52948 1817 aa23.7■■□□□ 1.38
CLN6-210ENST00000635747 NFKBIEO00221 500 aa23.69■■□□□ 1.38
CLN6-210ENST00000635747 ERFEQ4G0M1 354 aa23.69■■□□□ 1.38
CLN6-210ENST00000635747 NUTM1Q86Y26 1132 aa23.69■■□□□ 1.38
CLN6-210ENST00000635747 HYPKQ9NX55 129 aa23.69■■□□□ 1.38
CLN6-210ENST00000635747 COL11A2P13942 1736 aaPredicted RBP23.68■■□□□ 1.38
CLN6-210ENST00000635747 LTBP3Q9NS15 1303 aa23.68■■□□□ 1.38
CLN6-210ENST00000635747 RIC1Q4ADV7 1423 aa23.67■■□□□ 1.38
CLN6-210ENST00000635747 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
CLN6-210ENST00000635747 KIF3CO14782 793 aa23.67■■□□□ 1.38
CLN6-210ENST00000635747 NTSR2O95665 410 aa23.67■■□□□ 1.38
CLN6-210ENST00000635747 CRY2Q49AN0 593 aa23.67■■□□□ 1.38
CLN6-210ENST00000635747 UTP14AQ9BVJ6 771 aaKnown RBP23.67■■□□□ 1.38
CLN6-210ENST00000635747 TAOK3Q9H2K8 898 aa23.67■■□□□ 1.38
CLN6-210ENST00000635747 TCIRG1Q13488 830 aa23.66■■□□□ 1.38
CLN6-210ENST00000635747 CCDC93Q567U6 631 aa23.66■■□□□ 1.38
CLN6-210ENST00000635747 SBF1O95248 1867 aa23.65■■□□□ 1.38
CLN6-210ENST00000635747 ANKRD13DQ6ZTN6 518 aa23.65■■□□□ 1.38
CLN6-210ENST00000635747 PLBD2Q8NHP8 589 aa23.65■■□□□ 1.38
CLN6-210ENST00000635747 C7orf43Q8WVR3 580 aa23.65■■□□□ 1.38
CLN6-210ENST00000635747 RPGRQ92834 1020 aaKnown RBP23.65■■□□□ 1.38
CLN6-210ENST00000635747 ABCC12Q96J65 1359 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms