RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 H7C1W4 665 aa12.02□□□□□ -0.49
LINC01108-202ENST00000635227 RHPN1Q8TCX5 695 aa12.02□□□□□ -0.49
LINC01108-202ENST00000635227 SLC16A10Q8TF71 515 aa12.02□□□□□ -0.49
LINC01108-202ENST00000635227 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
LINC01108-202ENST00000635227 NESP48681 1621 aa12□□□□□ -0.49
LINC01108-202ENST00000635227 UBAP2LQ14157 1087 aaKnown RBP12□□□□□ -0.49
LINC01108-202ENST00000635227 SV2AQ7L0J3 742 aa12□□□□□ -0.49
LINC01108-202ENST00000635227 GPR161Q8N6U8 529 aaKnown RBP12□□□□□ -0.49
LINC01108-202ENST00000635227 VSIG8P0DPA2 414 aa11.99□□□□□ -0.49
LINC01108-202ENST00000635227 EFHC2Q5JST6 749 aa11.99□□□□□ -0.49
LINC01108-202ENST00000635227 GTPBP3Q969Y2 492 aaKnown RBP11.99□□□□□ -0.49
LINC01108-202ENST00000635227 GMCL1Q96IK5 515 aa11.99□□□□□ -0.49
LINC01108-202ENST00000635227 ARHGEF11O15085 1522 aa11.98□□□□□ -0.49
LINC01108-202ENST00000635227 GPR25O00155 361 aa11.98□□□□□ -0.49
LINC01108-202ENST00000635227 WFS1O76024 890 aa11.98□□□□□ -0.49
LINC01108-202ENST00000635227 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
LINC01108-202ENST00000635227 RTN1Q16799 776 aa11.98□□□□□ -0.49
LINC01108-202ENST00000635227 LRRC69Q6ZNQ3 347 aa11.98□□□□□ -0.49
LINC01108-202ENST00000635227 LBRQ14739 615 aaKnown RBP11.97□□□□□ -0.49
LINC01108-202ENST00000635227 TREML4Q6UXN2 200 aa11.97□□□□□ -0.49
LINC01108-202ENST00000635227 ZNF280CQ8ND82 737 aa11.97□□□□□ -0.49
LINC01108-202ENST00000635227 IRF7Q92985 503 aa11.97□□□□□ -0.49
LINC01108-202ENST00000635227 COL26A1Q96A83 441 aa11.97□□□□□ -0.49
LINC01108-202ENST00000635227 HSH2DQ96JZ2 352 aa11.97□□□□□ -0.49
LINC01108-202ENST00000635227 SAP130Q9H0E3 1048 aa11.97□□□□□ -0.49
LINC01108-202ENST00000635227 SEPT3Q9UH03 358 aa11.97□□□□□ -0.49
LINC01108-202ENST00000635227 LRFN2Q9ULH4 789 aa11.97□□□□□ -0.49
LINC01108-202ENST00000635227 PDE4CQ08493 712 aa11.96□□□□□ -0.49
LINC01108-202ENST00000635227 LCE2AQ5TA79 106 aaPredicted RBP11.96□□□□□ -0.49
LINC01108-202ENST00000635227 NLRP8Q86W28 1048 aa11.96□□□□□ -0.49
LINC01108-202ENST00000635227 ZCCHC2Q9C0B9 1178 aaKnown RBP11.96□□□□□ -0.49
LINC01108-202ENST00000635227 KLK14Q9P0G3 267 aa11.96□□□□□ -0.49
LINC01108-202ENST00000635227 GPC6Q9Y625 555 aaPredicted RBP11.96□□□□□ -0.49
LINC01108-202ENST00000635227 PTCD1O75127 700 aaKnown RBP11.95□□□□□ -0.5
LINC01108-202ENST00000635227 COX20Q5RI15 118 aa11.95□□□□□ -0.5
LINC01108-202ENST00000635227 MYO19Q96H55 970 aa11.95□□□□□ -0.5
LINC01108-202ENST00000635227 SUSD3Q96L08 255 aa11.95□□□□□ -0.5
LINC01108-202ENST00000635227 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC01108-202ENST00000635227 GJA3Q9Y6H8 435 aa11.95□□□□□ -0.5
LINC01108-202ENST00000635227 DGKZQ13574 1117 aa11.94□□□□□ -0.5
LINC01108-202ENST00000635227 CYB5RLQ6IPT4 315 aa11.94□□□□□ -0.5
LINC01108-202ENST00000635227 BCS1LQ9Y276 419 aa11.94□□□□□ -0.5
LINC01108-202ENST00000635227 C16orf46Q6P387 395 aa11.93□□□□□ -0.5
LINC01108-202ENST00000635227 NEUROD4Q9HD90 331 aa11.93□□□□□ -0.5
LINC01108-202ENST00000635227 BNIP3LO60238 219 aa11.92□□□□□ -0.5
LINC01108-202ENST00000635227 NDFIP2Q9NV92 336 aa11.92□□□□□ -0.5
LINC01108-202ENST00000635227 ATXN7O15265 892 aaPredicted RBP11.91□□□□□ -0.5
LINC01108-202ENST00000635227 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
LINC01108-202ENST00000635227 FOXR1Q6PIV2 292 aa11.91□□□□□ -0.5
LINC01108-202ENST00000635227 FIGNL1Q6PIW4 674 aa11.91□□□□□ -0.5
LINC01108-202ENST00000635227 ABHD17AQ96GS6 310 aa11.91□□□□□ -0.5
LINC01108-202ENST00000635227 HCN2Q9UL51 889 aa11.91□□□□□ -0.5
LINC01108-202ENST00000635227 PCDHGC4Q9Y5F7 938 aa11.91□□□□□ -0.5
LINC01108-202ENST00000635227 LMTK3Q96Q04 1460 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 DCDC2BA2VCK2 349 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 GMPRP36959 345 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 SMARCA2P51531 1590 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 GAS6Q14393 721 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 C11orf91Q3C1V1 193 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 RNFT1Q5M7Z0 435 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 COL25A1Q9BXS0 654 aaPredicted RBP11.9□□□□□ -0.5
LINC01108-202ENST00000635227 ANKIB1Q9P2G1 1089 aa11.9□□□□□ -0.5
LINC01108-202ENST00000635227 KRT76Q01546 638 aa11.89□□□□□ -0.51
LINC01108-202ENST00000635227 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
LINC01108-202ENST00000635227 TNFRSF10BO14763 440 aa11.88□□□□□ -0.51
LINC01108-202ENST00000635227 TNP2Q05952 138 aa11.88□□□□□ -0.51
LINC01108-202ENST00000635227 FAM26DQ5JW98 314 aa11.88□□□□□ -0.51
LINC01108-202ENST00000635227 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
LINC01108-202ENST00000635227 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
LINC01108-202ENST00000635227 TGFBR3LH3BV60 316 aa11.87□□□□□ -0.51
LINC01108-202ENST00000635227 KHNYNO15037 678 aaKnown RBP11.87□□□□□ -0.51
LINC01108-202ENST00000635227 FAM157BP0CG42 384 aa11.87□□□□□ -0.51
LINC01108-202ENST00000635227 MAPTP10636 758 aaKnown RBP11.87□□□□□ -0.51
LINC01108-202ENST00000635227 HIF1AQ16665 826 aa11.87□□□□□ -0.51
LINC01108-202ENST00000635227 BTLAQ7Z6A9 289 aa11.87□□□□□ -0.51
LINC01108-202ENST00000635227 IFT43Q96FT9 208 aa11.87□□□□□ -0.51
LINC01108-202ENST00000635227 CFHR5Q9BXR6 569 aa11.87□□□□□ -0.51
LINC01108-202ENST00000635227 DMGDHQ9UI17 866 aaKnown RBP11.87□□□□□ -0.51
LINC01108-202ENST00000635227 ATXN7L1Q9ULK2 861 aaPredicted RBP11.87□□□□□ -0.51
LINC01108-202ENST00000635227 CEP63Q96MT8 703 aa11.86□□□□□ -0.51
LINC01108-202ENST00000635227 DNMT3AQ9Y6K1 912 aaPredicted RBP11.86□□□□□ -0.51
LINC01108-202ENST00000635227 EFSO43281 561 aa11.85□□□□□ -0.51
LINC01108-202ENST00000635227 BRD1O95696 1058 aa11.85□□□□□ -0.51
LINC01108-202ENST00000635227 TYRO3Q06418 890 aa11.85□□□□□ -0.51
LINC01108-202ENST00000635227 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
LINC01108-202ENST00000635227 IER5Q5VY09 327 aa11.85□□□□□ -0.51
LINC01108-202ENST00000635227 ETFBKMTQ8IXQ9 262 aa11.85□□□□□ -0.51
LINC01108-202ENST00000635227 STRN4Q9NRL3 753 aa11.85□□□□□ -0.51
LINC01108-202ENST00000635227 PHF24Q9UPV7 400 aa11.85□□□□□ -0.51
LINC01108-202ENST00000635227 KIF21AQ7Z4S6 1674 aa11.84□□□□□ -0.51
LINC01108-202ENST00000635227 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
LINC01108-202ENST00000635227 CNTNAP3BQ96NU0 1288 aa11.84□□□□□ -0.51
LINC01108-202ENST00000635227 CNTNAP3Q9BZ76 1288 aa11.84□□□□□ -0.51
LINC01108-202ENST00000635227 PDIA4P13667 645 aaKnown RBP11.83□□□□□ -0.52
LINC01108-202ENST00000635227 CD33P20138 364 aa11.83□□□□□ -0.52
LINC01108-202ENST00000635227 FGFR3P22607 806 aa11.83□□□□□ -0.52
LINC01108-202ENST00000635227 BRD2P25440 801 aaKnown RBP11.83□□□□□ -0.52
LINC01108-202ENST00000635227 SERPINB4P48594 390 aa11.83□□□□□ -0.52
LINC01108-202ENST00000635227 TXNDC2Q86VQ3 553 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms