RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SMCR8Q8TEV9 937 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 USP6NLQ92738 828 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 MRFAP1L1Q96HT8 127 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 SLKQ9H2G2 1235 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 AGLP35573 1532 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 VCAM1P19320 739 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 DPH6Q7L8W6 267 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 IQCF2Q8IXL9 164 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 DNAAF4Q8WXU2 420 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 PHF12Q96QT6 1004 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 RUFY1Q96T51 708 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 EXOC1Q9NV70 894 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 NOL7Q9UMY1 257 aaKnown RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 ZC3H13Q5T200 1668 aaKnown RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 NCOA1Q15788 1441 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 OATP04181 439 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 S100BP04271 92 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 CDC37Q16543 378 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 HDGFL2Q7Z4V5 671 aaPredicted RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 WAPLQ7Z5K2 1190 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 DRC7Q8IY82 874 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 MICALL1Q8N3F8 863 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 PPP1R9BQ96SB3 815 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 IWS1Q96ST2 819 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 LARP6Q9BRS8 491 aaKnown RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 CRACR2AQ9BSW2 395 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 JADE2Q9NQC1 790 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 KLF15Q9UIH9 416 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 FAN1Q9Y2M0 1017 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 RAPGEF2Q9Y4G8 1499 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 TPM1P09493 284 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 GUCY2CP25092 1073 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 PRPHP41219 470 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 GYS2P54840 703 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 TRAF1Q13077 416 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 NAALADL2Q58DX5 795 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 ZC3H12AQ5D1E8 599 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 MSL1Q68DK7 614 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 MYLK4Q86YV6 388 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 TEKT1Q969V4 418 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 TMOD4Q9NZQ9 345 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 PREX2Q70Z35 1606 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 EIF2AK4Q9P2K8 1649 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 RBM47A0AV96 593 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 KLHL33A6NCF5 533 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 COQ9O75208 318 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 PPFIA2O75334 1257 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 IRX1P78414 480 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 PTPROQ16827 1216 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 TRIM74Q86UV6 250 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 TRIM73Q86UV7 250 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 RASEFQ8IZ41 740 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 RASSF8Q8NHQ8 419 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 TDRD7Q8NHU6 1098 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 PMFBP1Q8TBY8 1022 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 TAF4BQ92750 862 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 RSRC1Q96IZ7 334 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 AK7Q96M32 723 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 IRF2BPLQ9H1B7 796 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 CWC25Q9NXE8 425 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 IP6K2Q9UHH9 426 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 PRR12Q9ULL5 1215 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 BICDL2A1A5D9 508 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 BMS1Q14692 1282 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 PNISRQ8TF01 805 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 SPATS2LQ9NUQ6 558 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 C6orf203Q9P0P8 240 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC61Q9Y6R9 512 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 CAMSAP2Q08AD1 1489 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 CD53P19397 219 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 HDLBPQ00341 1268 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 ZBTB17Q13105 803 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC174Q6PII3 467 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 MORC1Q86VD1 984 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 UNC45AQ9H3U1 944 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 ANTXR1Q9H6X2 564 aa4.55□□□□□ -1.68
R3HDM1-220ENST00000628915 MYO5CQ9NQX4 1742 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 GTF2F1P35269 517 aaKnown RBP eCLIP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 MNAT1P51948 309 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 SEPT2Q15019 361 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 BHMTQ93088 406 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 MKL1Q969V6 931 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 AGBL1Q96MI9 1066 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TANGO6Q9C0B7 1094 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TMCC3Q9ULS5 477 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 ZC3H4Q9UPT8 1303 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 PLXNC1O60486 1568 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 HECW1Q76N89 1606 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TSPY2A6NKD2 308 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TSPY3P0CV98 308 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TSPY8P0CW00 308 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 NASPP49321 788 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 NUCB2P80303 420 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TSPY1Q01534 308 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 GABPB1Q06547 395 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 TEX35Q5T0J7 233 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 RNF168Q8IYW5 571 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 RNF25Q96BH1 459 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 FAM81BQ96LP2 452 aa4.54□□□□□ -1.68
R3HDM1-220ENST00000628915 INO80BQ9C086 356 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms