RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 LENG1Q96BZ8 264 aaPredicted RBP6.91□□□□□ -1.3
PTP4A2-220ENST00000627328 XAGE2Q96GT9 111 aa6.91□□□□□ -1.3
PTP4A2-220ENST00000627328 ZNF587Q96SQ5 575 aaPredicted RBP6.91□□□□□ -1.3
PTP4A2-220ENST00000627328 ALG2Q9H553 416 aa6.91□□□□□ -1.3
PTP4A2-220ENST00000627328 HRH3Q9Y5N1 445 aa6.91□□□□□ -1.3
PTP4A2-220ENST00000627328 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.3
PTP4A2-220ENST00000627328 JAG1P78504 1218 aa6.9□□□□□ -1.3
PTP4A2-220ENST00000627328 COL9A3Q14050 684 aaPredicted RBP6.9□□□□□ -1.3
PTP4A2-220ENST00000627328 TBC1D9Q6ZT07 1266 aa6.9□□□□□ -1.3
PTP4A2-220ENST00000627328 SLC51AQ86UW1 340 aa6.9□□□□□ -1.3
PTP4A2-220ENST00000627328 PLPP7Q8NBV4 271 aa6.9□□□□□ -1.3
PTP4A2-220ENST00000627328 RHBDD1Q8TEB9 315 aa6.9□□□□□ -1.3
PTP4A2-220ENST00000627328 FHDC1Q9C0D6 1143 aaPredicted RBP6.9□□□□□ -1.3
PTP4A2-220ENST00000627328 SELPP16109 830 aa6.89□□□□□ -1.31
PTP4A2-220ENST00000627328 OXLD1Q5BKU9 147 aa6.89□□□□□ -1.31
PTP4A2-220ENST00000627328 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
PTP4A2-220ENST00000627328 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
PTP4A2-220ENST00000627328 TSGA10IPQ3SY00 556 aa6.88□□□□□ -1.31
PTP4A2-220ENST00000627328 POM121Q96HA1 1249 aa6.88□□□□□ -1.31
PTP4A2-220ENST00000627328 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
PTP4A2-220ENST00000627328 ADARB2-AS1A8MUL3 147 aa6.87□□□□□ -1.31
PTP4A2-220ENST00000627328 NID1P14543 1247 aa6.87□□□□□ -1.31
PTP4A2-220ENST00000627328 TRAPPC3LQ5T215 181 aa6.87□□□□□ -1.31
PTP4A2-220ENST00000627328 MDFIQ99750 246 aa6.87□□□□□ -1.31
PTP4A2-220ENST00000627328 INHAP05111 366 aa6.86□□□□□ -1.31
PTP4A2-220ENST00000627328 EML3Q32P44 896 aa6.86□□□□□ -1.31
PTP4A2-220ENST00000627328 PPARGC1BQ86YN6 1023 aaKnown RBP6.86□□□□□ -1.31
PTP4A2-220ENST00000627328 ETNK1Q9HBU6 452 aa6.86□□□□□ -1.31
PTP4A2-220ENST00000627328 SIN3BO75182 1162 aa6.85□□□□□ -1.31
PTP4A2-220ENST00000627328 FAM157BP0CG42 384 aa6.85□□□□□ -1.31
PTP4A2-220ENST00000627328 SSTR4P31391 388 aa6.85□□□□□ -1.31
PTP4A2-220ENST00000627328 SYT9Q86SS6 491 aa6.85□□□□□ -1.31
PTP4A2-220ENST00000627328 MICALL1Q8N3F8 863 aa6.85□□□□□ -1.31
PTP4A2-220ENST00000627328 MARK1Q9P0L2 795 aa6.85□□□□□ -1.31
PTP4A2-220ENST00000627328 HCN2Q9UL51 889 aa6.85□□□□□ -1.31
PTP4A2-220ENST00000627328 NOD1Q9Y239 953 aa6.85□□□□□ -1.31
PTP4A2-220ENST00000627328 GDF10P55107 478 aa6.84□□□□□ -1.31
PTP4A2-220ENST00000627328 RAC1P63000 192 aa6.84□□□□□ -1.31
PTP4A2-220ENST00000627328 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
PTP4A2-220ENST00000627328 ALBP02768 609 aa6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 SKIP12755 728 aa6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 CD97P48960 835 aa6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 SCNN1DP51172 638 aa6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 GP2P55259 537 aaKnown RBP6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 TLR1Q15399 786 aa6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 SLC4A9Q96Q91 983 aa6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 USP21Q9UK80 565 aa6.83□□□□□ -1.32
PTP4A2-220ENST00000627328 A0A0A0MRY4 1105 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 A0A1W2PNR3 127 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 PIK3CDO00329 1044 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 BACH1O14867 736 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 ATP4AP20648 1035 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 PLA2G4AP47712 749 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 SMTNP53814 917 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 TRIM50Q86XT4 487 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 PLEKHM2Q8IWE5 1019 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 PCDHGA11Q9Y5H2 935 aa6.82□□□□□ -1.32
PTP4A2-220ENST00000627328 A6NJR5 290 aa6.81□□□□□ -1.32
PTP4A2-220ENST00000627328 USP17L5A8MUK1 530 aa6.81□□□□□ -1.32
PTP4A2-220ENST00000627328 ARSJQ5FYB0 599 aaPredicted RBP6.81□□□□□ -1.32
PTP4A2-220ENST00000627328 HDGFL1Q5TGJ6 251 aa6.81□□□□□ -1.32
PTP4A2-220ENST00000627328 PROSER2Q86WR7 435 aaPredicted RBP6.81□□□□□ -1.32
PTP4A2-220ENST00000627328 FNBP4Q8N3X1 1017 aaPredicted RBP6.81□□□□□ -1.32
PTP4A2-220ENST00000627328 NIFKQ9BYG3 293 aaKnown RBP6.81□□□□□ -1.32
PTP4A2-220ENST00000627328 STARD13Q9Y3M8 1113 aa6.81□□□□□ -1.32
PTP4A2-220ENST00000627328 CDK2AP1O14519 115 aa6.8□□□□□ -1.32
PTP4A2-220ENST00000627328 ATP1A2P50993 1020 aa6.8□□□□□ -1.32
PTP4A2-220ENST00000627328 NCOA4Q13772 614 aa6.8□□□□□ -1.32
PTP4A2-220ENST00000627328 MTFR1Q15390 333 aa6.8□□□□□ -1.32
PTP4A2-220ENST00000627328 C8orf86Q6ZUL3 223 aa6.8□□□□□ -1.32
PTP4A2-220ENST00000627328 TNFRSF25Q93038 417 aa6.8□□□□□ -1.32
PTP4A2-220ENST00000627328 GJA3Q9Y6H8 435 aa6.8□□□□□ -1.32
PTP4A2-220ENST00000627328 A6NJY4 79 aa6.79□□□□□ -1.32
PTP4A2-220ENST00000627328 POM121CA8CG34 1229 aa6.79□□□□□ -1.32
PTP4A2-220ENST00000627328 TMEM229AB2RXF0 380 aa6.79□□□□□ -1.32
PTP4A2-220ENST00000627328 GTF2IP78347 998 aa6.79□□□□□ -1.32
PTP4A2-220ENST00000627328 SAMD5Q5TGI4 173 aa6.79□□□□□ -1.32
PTP4A2-220ENST00000627328 SHISA2Q6UWI4 295 aa6.79□□□□□ -1.32
PTP4A2-220ENST00000627328 ADAMTS19Q8TE59 1207 aa6.79□□□□□ -1.32
PTP4A2-220ENST00000627328 AIDAQ96BJ3 306 aa6.79□□□□□ -1.32
PTP4A2-220ENST00000627328 ATP9BO43861 1147 aa6.78□□□□□ -1.32
PTP4A2-220ENST00000627328 LILRB5O75023 590 aa6.78□□□□□ -1.32
PTP4A2-220ENST00000627328 PRR23CQ6ZRP0 262 aa6.78□□□□□ -1.32
PTP4A2-220ENST00000627328 USP17L3A6NCW0 530 aa6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 USP17L4A6NCW7 530 aa6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 KIAA1324LA8MWY0 1029 aaPredicted RBP6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 EFSO43281 561 aa6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 STAU1O95793 577 aaKnown RBP6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 TATP17735 454 aaPredicted RBP6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 PSME1Q06323 249 aa6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 NBPF1Q3BBV0 1214 aa6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 USP17L2Q6R6M4 530 aa6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 USP17L1Q7RTZ2 530 aa6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 CLUAP1Q96AJ1 413 aa6.77□□□□□ -1.33
PTP4A2-220ENST00000627328 FSTP19883 344 aa6.76□□□□□ -1.33
PTP4A2-220ENST00000627328 ADH7P40394 386 aa6.76□□□□□ -1.33
PTP4A2-220ENST00000627328 NEUROD1Q13562 356 aa6.76□□□□□ -1.33
PTP4A2-220ENST00000627328 C20orf204Q6ZNR8 217 aa6.76□□□□□ -1.33
PTP4A2-220ENST00000627328 LARGE2Q8N3Y3 721 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms