RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ADCY9O60503 1353 aa21.68■■□□□ 1.06
PCF11-207ENST00000624931 RAB3GAP1Q15042 981 aa21.67■■□□□ 1.06
PCF11-207ENST00000624931 RBM42Q9BTD8 480 aaKnown RBP21.67■■□□□ 1.06
PCF11-207ENST00000624931 GRPEL1Q9HAV7 217 aa21.67■■□□□ 1.06
PCF11-207ENST00000624931 KCNQ2O43526 872 aa21.66■■□□□ 1.06
PCF11-207ENST00000624931 AIMP1Q12904 312 aaKnown RBP21.66■■□□□ 1.06
PCF11-207ENST00000624931 CHMP4AQ9BY43 222 aa21.66■■□□□ 1.06
PCF11-207ENST00000624931 QTRT2Q9H974 415 aaKnown RBP21.66■■□□□ 1.06
PCF11-207ENST00000624931 SLC4A9Q96Q91 983 aa21.66■■□□□ 1.06
PCF11-207ENST00000624931 HYPKQ9NX55 129 aa21.66■■□□□ 1.06
PCF11-207ENST00000624931 PXDNLA1KZ92 1463 aa21.65■■□□□ 1.06
PCF11-207ENST00000624931 PI4KAP2A4QPH2 592 aa21.65■■□□□ 1.06
PCF11-207ENST00000624931 LRP10Q7Z4F1 713 aa21.65■■□□□ 1.06
PCF11-207ENST00000624931 DNAJC10Q8IXB1 793 aa21.65■■□□□ 1.06
PCF11-207ENST00000624931 PI4KAP1Q8N8J0 262 aa21.65■■□□□ 1.06
PCF11-207ENST00000624931 MEIS3Q99687 375 aa21.65■■□□□ 1.06
PCF11-207ENST00000624931 TJP1Q07157 1748 aa21.65■■□□□ 1.06
PCF11-207ENST00000624931 NBPF26B4DH59 902 aa21.64■■□□□ 1.06
PCF11-207ENST00000624931 NBPF14Q5TI25 921 aa21.64■■□□□ 1.06
PCF11-207ENST00000624931 NBPF10Q6P3W6 841 aaKnown RBP21.64■■□□□ 1.06
PCF11-207ENST00000624931 NBPF15Q8N660 670 aa21.64■■□□□ 1.06
PCF11-207ENST00000624931 LNPKQ9C0E8 428 aa21.64■■□□□ 1.06
PCF11-207ENST00000624931 A1BGP04217 495 aa21.63■■□□□ 1.05
PCF11-207ENST00000624931 CCT4P50991 539 aaKnown RBP21.63■■□□□ 1.05
PCF11-207ENST00000624931 CLEC17AQ6ZS10 378 aa21.63■■□□□ 1.05
PCF11-207ENST00000624931 PTF1AQ7RTS3 328 aa21.63■■□□□ 1.05
PCF11-207ENST00000624931 XAGE3Q8WTP9 111 aa21.63■■□□□ 1.05
PCF11-207ENST00000624931 GOLGA6L22H0YM25 854 aa21.63■■□□□ 1.05
PCF11-207ENST00000624931 SEPT12Q8IYM1 358 aa21.63■■□□□ 1.05
PCF11-207ENST00000624931 TNPO1Q92973 898 aaKnown RBP21.63■■□□□ 1.05
PCF11-207ENST00000624931 GZF1Q9H116 711 aaPredicted RBP21.63■■□□□ 1.05
PCF11-207ENST00000624931 DNAAF4Q8WXU2 420 aa21.62■■□□□ 1.05
PCF11-207ENST00000624931 MAP3K2Q9Y2U5 619 aa21.62■■□□□ 1.05
PCF11-207ENST00000624931 K7ELQ4 463 aaPredicted RBP21.61■■□□□ 1.05
PCF11-207ENST00000624931 COPS6Q7L5N1 327 aa21.61■■□□□ 1.05
PCF11-207ENST00000624931 ANKRD45Q5TZF3 282 aa21.6■■□□□ 1.05
PCF11-207ENST00000624931 ONECUT3O60422 494 aaPredicted RBP21.59■■□□□ 1.05
PCF11-207ENST00000624931 HSP90AA1P07900 732 aaKnown RBP21.59■■□□□ 1.05
PCF11-207ENST00000624931 KSR2Q6VAB6 950 aa21.59■■□□□ 1.05
PCF11-207ENST00000624931 BRWD3Q6RI45 1802 aa21.59■■□□□ 1.05
PCF11-207ENST00000624931 NHSQ6T4R5 1651 aa21.59■■□□□ 1.05
PCF11-207ENST00000624931 ATP10DQ9P241 1426 aa21.59■■□□□ 1.05
PCF11-207ENST00000624931 CDC45O75419 566 aa21.58■■□□□ 1.05
PCF11-207ENST00000624931 BEND3Q5T5X7 828 aa21.58■■□□□ 1.05
PCF11-207ENST00000624931 IBTKQ9P2D0 1353 aaPredicted RBP21.58■■□□□ 1.05
PCF11-207ENST00000624931 ARFGEF2Q9Y6D5 1785 aa21.58■■□□□ 1.05
PCF11-207ENST00000624931 PALLDQ8WX93 1383 aa21.58■■□□□ 1.04
PCF11-207ENST00000624931 VSIG10Q8N0Z9 540 aa21.58■■□□□ 1.04
PCF11-207ENST00000624931 ERBB4Q15303 1308 aa21.57■■□□□ 1.04
PCF11-207ENST00000624931 BTAF1O14981 1849 aa21.57■■□□□ 1.04
PCF11-207ENST00000624931 SIRT2Q8IXJ6 389 aa21.57■■□□□ 1.04
PCF11-207ENST00000624931 KIF2CQ99661 725 aa21.57■■□□□ 1.04
PCF11-207ENST00000624931 PANK2Q9BZ23 570 aa21.57■■□□□ 1.04
PCF11-207ENST00000624931 SRCIN1Q9C0H9 1055 aa21.57■■□□□ 1.04
PCF11-207ENST00000624931 TRIM44Q96DX7 344 aaPredicted RBP21.56■■□□□ 1.04
PCF11-207ENST00000624931 SBF2Q86WG5 1849 aa21.55■■□□□ 1.04
PCF11-207ENST00000624931 DDX58O95786 925 aaKnown RBP21.55■■□□□ 1.04
PCF11-207ENST00000624931 TBC1D9Q6ZT07 1266 aa21.55■■□□□ 1.04
PCF11-207ENST00000624931 TTLL7Q6ZT98 887 aa21.55■■□□□ 1.04
PCF11-207ENST00000624931 RIC3Q7Z5B4 369 aa21.55■■□□□ 1.04
PCF11-207ENST00000624931 FBXO41Q8TF61 875 aa21.55■■□□□ 1.04
PCF11-207ENST00000624931 NUP188Q5SRE5 1749 aa21.55■■□□□ 1.04
PCF11-207ENST00000624931 ESPNB1AK53 854 aa21.55■■□□□ 1.04
PCF11-207ENST00000624931 RABEP1Q15276 862 aa21.55■■□□□ 1.04
PCF11-207ENST00000624931 CWF19L2Q2TBE0 894 aaKnown RBP21.55■■□□□ 1.04
PCF11-207ENST00000624931 ZNF330Q9Y3S2 320 aaPredicted RBP21.55■■□□□ 1.04
PCF11-207ENST00000624931 CYP19A1P11511 503 aaPredicted RBP21.54■■□□□ 1.04
PCF11-207ENST00000624931 USP44Q9H0E7 712 aa21.54■■□□□ 1.04
PCF11-207ENST00000624931 ITPK1Q13572 414 aa21.53■■□□□ 1.04
PCF11-207ENST00000624931 LOC102724428A0A0B4J2F2 783 aa21.52■■□□□ 1.04
PCF11-207ENST00000624931 SIK1P57059 783 aa21.52■■□□□ 1.04
PCF11-207ENST00000624931 NUCB2P80303 420 aa21.52■■□□□ 1.04
PCF11-207ENST00000624931 MYD88Q99836 296 aa21.52■■□□□ 1.04
PCF11-207ENST00000624931 TEX13AQ9BXU3 409 aaPredicted RBP21.52■■□□□ 1.04
PCF11-207ENST00000624931 STARD3NLO95772 234 aa21.52■■□□□ 1.03
PCF11-207ENST00000624931 CEP85Q6P2H3 762 aa21.52■■□□□ 1.03
PCF11-207ENST00000624931 ANKRD13DQ6ZTN6 518 aa21.52■■□□□ 1.03
PCF11-207ENST00000624931 ANP32BQ92688 251 aaKnown RBP21.52■■□□□ 1.03
PCF11-207ENST00000624931 ZBTB1Q9Y2K1 713 aa21.52■■□□□ 1.03
PCF11-207ENST00000624931 CICQ96RK0 1608 aaPredicted RBP21.51■■□□□ 1.03
PCF11-207ENST00000624931 IGKV5-2P06315 115 aa21.51■■□□□ 1.03
PCF11-207ENST00000624931 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
PCF11-207ENST00000624931 KCNQ4P56696 695 aa21.51■■□□□ 1.03
PCF11-207ENST00000624931 CCDC173Q0VFZ6 552 aa21.51■■□□□ 1.03
PCF11-207ENST00000624931 ZNF772Q68DY9 489 aaPredicted RBP21.51■■□□□ 1.03
PCF11-207ENST00000624931 LRRFIP2Q9Y608 721 aaKnown RBP21.51■■□□□ 1.03
PCF11-207ENST00000624931 AFDNP55196 1824 aaKnown RBP21.51■■□□□ 1.03
PCF11-207ENST00000624931 GLIPR1L2Q4G1C9 344 aa21.5■■□□□ 1.03
PCF11-207ENST00000624931 NAP1L5Q96NT1 182 aaPredicted RBP21.5■■□□□ 1.03
PCF11-207ENST00000624931 METTL22Q9BUU2 404 aaPredicted RBP21.5■■□□□ 1.03
PCF11-207ENST00000624931 ZBTB3Q9H5J0 574 aa21.5■■□□□ 1.03
PCF11-207ENST00000624931 NBPF7P0C2Y1 421 aaPredicted RBP21.49■■□□□ 1.03
PCF11-207ENST00000624931 KLHL40Q2TBA0 621 aa21.49■■□□□ 1.03
PCF11-207ENST00000624931 ANKRD44Q8N8A2 993 aa21.49■■□□□ 1.03
PCF11-207ENST00000624931 SMARCC1Q92922 1105 aaPredicted RBP21.49■■□□□ 1.03
PCF11-207ENST00000624931 ARXQ96QS3 562 aa21.49■■□□□ 1.03
PCF11-207ENST00000624931 CWC22Q9HCG8 908 aaKnown RBP21.49■■□□□ 1.03
PCF11-207ENST00000624931 GNAI2P04899 355 aa21.49■■□□□ 1.03
PCF11-207ENST00000624931 GNAI3P08754 354 aa21.49■■□□□ 1.03
PCF11-207ENST00000624931 UBTFL1P0CB47 393 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms