RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 MICALL2Q8IY33 904 aa13.05□□□□□ -0.32
ATRX-216ENST00000624403 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
ATRX-216ENST00000624403 PRAMEF22A3QJZ6 481 aa13.04□□□□□ -0.32
ATRX-216ENST00000624403 F6X3S4 739 aa13.04□□□□□ -0.32
ATRX-216ENST00000624403 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
ATRX-216ENST00000624403 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
ATRX-216ENST00000624403 SLIT2O94813 1529 aa13.03□□□□□ -0.32
ATRX-216ENST00000624403 ST18O60284 1047 aa13.03□□□□□ -0.32
ATRX-216ENST00000624403 CCT4P50991 539 aaKnown RBP13.03□□□□□ -0.32
ATRX-216ENST00000624403 TTC5Q8N0Z6 440 aa13.03□□□□□ -0.32
ATRX-216ENST00000624403 ZNF496Q96IT1 587 aaPredicted RBP13.03□□□□□ -0.32
ATRX-216ENST00000624403 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
ATRX-216ENST00000624403 SPATA31A1Q5TZJ5 1347 aa13.03□□□□□ -0.32
ATRX-216ENST00000624403 SLC4A10Q6U841 1118 aa13.02□□□□□ -0.33
ATRX-216ENST00000624403 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
ATRX-216ENST00000624403 C1orf115Q9H7X2 142 aa13.02□□□□□ -0.33
ATRX-216ENST00000624403 DBF4Q9UBU7 674 aaPredicted RBP13.02□□□□□ -0.33
ATRX-216ENST00000624403 SPATA31A5Q5VU36 1347 aa13.02□□□□□ -0.33
ATRX-216ENST00000624403 SPATA31A7Q8IWB4 1347 aa13.02□□□□□ -0.33
ATRX-216ENST00000624403 ANXA1P04083 346 aa13.01□□□□□ -0.33
ATRX-216ENST00000624403 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
ATRX-216ENST00000624403 THRAP3Q9Y2W1 955 aaKnown RBP13.01□□□□□ -0.33
ATRX-216ENST00000624403 NWD2Q9ULI1 1742 aa13.01□□□□□ -0.33
ATRX-216ENST00000624403 WNK3Q9BYP7 1800 aa13.01□□□□□ -0.33
ATRX-216ENST00000624403 C5P01031 1676 aa13□□□□□ -0.33
ATRX-216ENST00000624403 PXDNLA1KZ92 1463 aa13□□□□□ -0.33
ATRX-216ENST00000624403 TNS2Q63HR2 1409 aa13□□□□□ -0.33
ATRX-216ENST00000624403 EXOC5O00471 708 aa13□□□□□ -0.33
ATRX-216ENST00000624403 SNRPA1P09661 255 aaKnown RBP13□□□□□ -0.33
ATRX-216ENST00000624403 PROSER3Q2NL68 480 aa13□□□□□ -0.33
ATRX-216ENST00000624403 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 GLI3P10071 1580 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 SPATA31A6Q5VVP1 1343 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 PDIA6Q15084 440 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 UNC5CLQ8IV45 518 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 C8orf37Q96NL8 207 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 MEIS3Q99687 375 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 DDX21Q9NR30 783 aaKnown RBP eCLIP12.99□□□□□ -0.33
ATRX-216ENST00000624403 HYPKQ9NX55 129 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 CACNA1FO60840 1977 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 LRP6O75581 1613 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 PAPPAQ13219 1627 aa12.99□□□□□ -0.33
ATRX-216ENST00000624403 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
ATRX-216ENST00000624403 SNPHO15079 494 aa12.98□□□□□ -0.33
ATRX-216ENST00000624403 HSPA1LP34931 641 aa12.98□□□□□ -0.33
ATRX-216ENST00000624403 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
ATRX-216ENST00000624403 HS6ST3Q8IZP7 471 aa12.98□□□□□ -0.33
ATRX-216ENST00000624403 NGLY1Q96IV0 654 aa12.98□□□□□ -0.33
ATRX-216ENST00000624403 TMOD3Q9NYL9 352 aa12.98□□□□□ -0.33
ATRX-216ENST00000624403 CCDC9Q9Y3X0 531 aaKnown RBP12.98□□□□□ -0.33
ATRX-216ENST00000624403 ADCY9O60503 1353 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 PI4KAP2A4QPH2 592 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 RGS3P49796 1198 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 BARGINQ6ZT62 677 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 SMC5Q8IY18 1101 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 PI4KAP1Q8N8J0 262 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
ATRX-216ENST00000624403 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
ATRX-216ENST00000624403 VPS72Q15906 364 aa12.96□□□□□ -0.33
ATRX-216ENST00000624403 ANKRD44Q8N8A2 993 aa12.96□□□□□ -0.33
ATRX-216ENST00000624403 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.33
ATRX-216ENST00000624403 PIGBQ92521 554 aa12.96□□□□□ -0.33
ATRX-216ENST00000624403 N4BP2Q86UW6 1770 aaPredicted RBP12.96□□□□□ -0.34
ATRX-216ENST00000624403 UBR2Q8IWV8 1755 aa12.96□□□□□ -0.34
ATRX-216ENST00000624403 DDB1Q16531 1140 aa12.95□□□□□ -0.34
ATRX-216ENST00000624403 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
ATRX-216ENST00000624403 CEP85Q6P2H3 762 aa12.95□□□□□ -0.34
ATRX-216ENST00000624403 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
ATRX-216ENST00000624403 FNBP4Q8N3X1 1017 aaPredicted RBP12.95□□□□□ -0.34
ATRX-216ENST00000624403 SRCIN1Q9C0H9 1055 aa12.95□□□□□ -0.34
ATRX-216ENST00000624403 RBM19Q9Y4C8 960 aaKnown RBP12.95□□□□□ -0.34
ATRX-216ENST00000624403 PTCD1O75127 700 aaKnown RBP12.94□□□□□ -0.34
ATRX-216ENST00000624403 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
ATRX-216ENST00000624403 GNAI3P08754 354 aa12.94□□□□□ -0.34
ATRX-216ENST00000624403 MYL6BP14649 208 aa12.94□□□□□ -0.34
ATRX-216ENST00000624403 LRP10Q7Z4F1 713 aa12.94□□□□□ -0.34
ATRX-216ENST00000624403 RPAP2Q8IXW5 612 aaPredicted RBP12.94□□□□□ -0.34
ATRX-216ENST00000624403 ATG3Q9NT62 314 aa12.94□□□□□ -0.34
ATRX-216ENST00000624403 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
ATRX-216ENST00000624403 MAP3K2Q9Y2U5 619 aa12.94□□□□□ -0.34
ATRX-216ENST00000624403 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
ATRX-216ENST00000624403 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
ATRX-216ENST00000624403 GNAI2P04899 355 aa12.93□□□□□ -0.34
ATRX-216ENST00000624403 PIP4K2AP48426 406 aaPredicted RBP12.93□□□□□ -0.34
ATRX-216ENST00000624403 NUCB1Q02818 461 aa12.93□□□□□ -0.34
ATRX-216ENST00000624403 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
ATRX-216ENST00000624403 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
ATRX-216ENST00000624403 XAGE3Q8WTP9 111 aa12.93□□□□□ -0.34
ATRX-216ENST00000624403 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
ATRX-216ENST00000624403 USP44Q9H0E7 712 aa12.93□□□□□ -0.34
ATRX-216ENST00000624403 BCL9O00512 1426 aa12.93□□□□□ -0.34
ATRX-216ENST00000624403 PDE4AP27815 886 aa12.92□□□□□ -0.34
ATRX-216ENST00000624403 PRIM1P49642 420 aaKnown RBP12.92□□□□□ -0.34
ATRX-216ENST00000624403 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
ATRX-216ENST00000624403 COPS6Q7L5N1 327 aa12.92□□□□□ -0.34
ATRX-216ENST00000624403 USP21Q9UK80 565 aa12.92□□□□□ -0.34
ATRX-216ENST00000624403 ITGB4P16144 1822 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms